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CDS Information : SH2288

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close this sectionGenomic map

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Staphylococcus haemolyticus JCSC1435 chromosome

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Overview 
Genome

close this sectionLocation

Organism Staphylococcus haemolyticus JCSC1435
Replicon chromosome
Start / Stop / Direction 2,322,157 / 2,321,204 / -
Location complement(2321204..2322157)
Type CDS
Length 954 bp (317 aa)

close this sectionAnnotation

Product ABC-type cobalamin/Fe3+-siderophores transport systems, permease components
Gene name
Functional category Cell envelope and cellular processes
- Transport / binding proteins and lipoproteins
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionComparative genome

Table
Display BBH1e-1001e-501e-101e-3
Staphylococcus epidermidis ATCC 12228Staphylococcus epidermidis RP62A
[384] SE0384 3e-88(317)
iron(III) ABC transporter permease protein
[262] SERP0267 2e-85(308)
iron compound ABC transporter, permease protein

close this sectionRelated links to external database

UniProtQ4L430
INSDBAE05597.1 (DDBJ GenBank EMBL)
RefSeqYP_254203.1
GI70727287
UniParcUPI000054BE49

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=1e-172Q4L430_STAHJABC-type cobalamin/Fe3+-siderophores transport systems, permease componentsAlignment
2E=1e-113C5QPX8_STAEPIron (Fe3+) ABC superfamily ATP binding cassette transporter, membrane proteinAlignment
3E=1e-113B9CRB4_STACPIron(III) ABC transporter permease proteinAlignment
4E=1e-105C4WA07_STAWAIron chelate uptake ABC transporter, FeCT family, permease proteinAlignment
5E=1e-101C5Q6U7_STAEPIron (Fe3+) ABC superfamily ATP binding cassette transporter, membrane proteinAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR000522 Bacterial transport system permease protein (Family)
 [30-312]  1.2e-64 PF01032
PF01032   FecCD
SignalP No significant hit
TMHMM 
 [7-26]  Transmembrane (i-o) [73-95]  Transmembrane (o-i) [100-122]  Transmembrane (i-o) [132-154]  Transmembrane (o-i) [177-199]  Transmembrane (i-o) [222-244]  Transmembrane (o-i) [257-279]  Transmembrane (i-o) [289-311]  Transmembrane (o-i)
Transmembrane 8   
SOSUI 
 [6-28]  Transmembrane [38-60]  Transmembrane [75-97]  Transmembrane [103-125]  Transmembrane [133-155]  Transmembrane [181-203]  Transmembrane [222-244]  Transmembrane [261-283]  Transmembrane [292-314]  Transmembrane
Transmembrane 9   

close this sectionCalculated information (Amino acid sequence)

size of protein 317 amino acids
molecular mass 34,717.51 Da
pI 10.05
aa composition
AlaValLeuIlePheTrpProMetGlySer
8.5
(27aa)		4.1
(13aa)		18.3
(58aa)		17
(54aa)		5
(16aa)		1.6
(5aa)		3.5
(11aa)		3.8
(12aa)		7.9
(25aa)		5.7
(18aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
5.4
(17aa)		0.6
(2aa)		3.2
(10aa)		3.5
(11aa)		3.2
(10aa)		2.8
(9aa)		0.3
(1aa)		2.8
(9aa)		1.6
(5aa)		1.3
(4aa)

open this sectionSequence