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CDS Information : SH2291

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close this sectionGenomic map

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Staphylococcus haemolyticus JCSC1435 chromosome

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Overview 
Genome

close this sectionLocation

Organism Staphylococcus haemolyticus JCSC1435
Replicon chromosome
Start / Stop / Direction 2,324,875 / 2,324,111 / -
Location complement(2324111..2324875)
Type CDS
Length 765 bp (254 aa)

close this sectionAnnotation

Product transcriptional regulator, MerR family
Gene name
Functional category Information pathways
- RNA synthesis
EC number
Note
KEGG pathway
Sequence feature
References

close this sectionComparative genome

Table
Display BBH1e-1001e-501e-101e-3
Staphylococcus epidermidis ATCC 12228Staphylococcus epidermidis RP62A
[382] SE0382 2e-52(197)
transcriptional regulator
[259] SERP0264 9e-53(199)
MerR family transcriptional regulator

close this sectionRelated links to external database

UniProtQ4L427
INSDBAE05600.1 (DDBJ GenBank EMBL)
RefSeqYP_254206.1
GI70727290
UniParcUPI000054BE4C

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=1e-143Q4L427_STAHJTranscriptional regulator, MerR familyAlignment
2E=9e-74C2LY10_STAHOTranscriptional regulator, MerR familyAlignment
3E=3e-65C5QPX4_STAEPMerR family transcriptional regulatorAlignment
4E=2e-63B9CRB7_STACPTranscriptional regulatorAlignment
5E=2e-56D1WJR4_STAEPTranscriptional regulator, MerR familyAlignment
HAMAP No significant hit
InterPro
Database:interpro:25.0
IPR000551 Bacterial regulatory protein, MerR (Domain)
 [8-45]  3.2e-10 PF00376
PF00376   MerR
 [6-75]  PS50937
PS50937   HTH_MERR_2
 [7-76]  1.49999977583352e-16 SM00422
SM00422   HTH_MERR
IPR009061 Putative DNA binding (Domain)
 [6-108]  8.3e-27 SSF46955
SSF46955   Putativ_DNA_bind
IPR012925 TipAS antibiotic-recognition (Domain)
 [128-253]  1.4e-13 PF07739
PF07739   TipAS
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 254 amino acids
molecular mass 30,650.68 Da
pI 4.82
aa composition
AlaValLeuIlePheTrpProMetGlySer
3.9
(10aa)		3.1
(8aa)		8.7
(22aa)		7.5
(19aa)		4.7
(12aa)		0
(0aa)		1.2
(3aa)		1.6
(4aa)		1.6
(4aa)		5.1
(13aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
4.7
(12aa)		0
(0aa)		12.2
(31aa)		8.3
(21aa)		8.7
(22aa)		5.1
(13aa)		3.5
(9aa)		4.7
(12aa)		8.3
(21aa)		7.1
(18aa)

open this sectionSequence