CDS Information : SJA_C1-00150

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Sphingobium japonicum UT26S (= NBRC 101211) chromosome1	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Sphingobium japonicum UT26S (= NBRC 101211)
Replicon	chromosome1
Start / Stop / Direction	12,193 / 11,534 / -
Location	complement(11534..12193)
Type	CDS
Length	660 bp (219 aa)

Product	putative ICC-like phosphoesterase
Gene name
Functional category	Other functions - miscellaneous
EC number
Note
KEGG pathway
Sequence feature
References

BLASTP Database:UniProtKB:8.8 show BLAST table	1 E=1e-100 Q1ND49_9SPHN Putative uncharacterized protein Alignment 2 E=1e-58 Q2N8L4_9SPHN Putative uncharacterized protein by acc 3 E=4e-56 Q2G5A0_NOVAD ICC-like phosphoesterase-like protein Alignment 4 E=5e-55 Q1GNP0_SPHAL Metallophosphoesterase Alignment 5 E=7e-40 Q36Z54_RHOPA (Q36Z54) Hypothetical protein not found in DB
HAMAP	No significant hit
InterPro Database:interpro:16.0	IPR011155 Phosphoesterase MJ0037 (Family) PIRSF000887   Predicted phosphoesterase, MJ0037 type
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	219 amino acids
molecular mass	23,780.24 Da
pI	8.32
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 15.1 (33aa) 5.5 (12aa) 12.3 (27aa) 2.3 (5aa) 5 (11aa) 2.7 (6aa) 6.4 (14aa) 2.7 (6aa) 9.1 (20aa) 5.9 (13aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 3.2 (7aa) 0.9 (2aa) 0.5 (1aa) 2.3 (5aa) 0 (0aa) 1.4 (3aa) 4.6 (10aa) 9.6 (21aa) 7.3 (16aa) 3.2 (7aa)

>SJA_C1-00150 putative ICC-like phosphoesterase
ATGGTTCCCCTTTCGTTCGCGGGTCACGATTTCCTGGCATTGCCGGAGGCCGCGCTGTTC
TGGCCGGCGCGCTCCGCCTTGCTGGTGGCCGACCTGCATTTCGAAAAGGCGAGCTGGTTC
GCCCGATCCGGACAATTCCTGCCCCCGCACGACAGCCAGGCGACGCTCGACATGGTGGAG
ATGCTGGTCCAGCGGACCGGCGCGCGGGCCGTCTGGTCGTTGGGCGACAGTTTTCACGAT
GCCGATGGCGCGGCGCGGCTCGACCCGACGGCGCGGGCAAGGCTGGCGGCGCTGACGGAC
AGGCTGGACTGGGTCTGGATCACCGGCAACCACGATGCCGGCATGGCGCAGGCGCCCGGC
GGCGCCCGGTGCGCGGACATGCAGGTCGACGGCATATGGCTGCGGCACGAAGCGGATCCC
GCCGATCCCCGTCCGGAGATTTCGGGGCACTTCCATCCCAAATTCCGCCTGTCGGTGCGC
GGCCGCCACGTGTCGCGGCGCTGCTTCGTCGAATCGCGGACCAAGTTGATCCTGCCCGCT
CTGGGAGCGCTAACGGGCGGTCTCGATGCCGGTCATGGGGAAATCCGCCGGGTAATGGGG
TCGGGGGCGAGCGCCTTGTTGCCGGTCGCCGGTCGGCTGCTGCGTTTTCCCTTAGCGTAA


>SJA_C1-00150 putative ICC-like phosphoesterase
MVPLSFAGHDFLALPEAALFWPARSALLVADLHFEKASWFARSGQFLPPHDSQATLDMVE
MLVQRTGARAVWSLGDSFHDADGAARLDPTARARLAALTDRLDWVWITGNHDAGMAQAPG
GARCADMQVDGIWLRHEADPADPRPEISGHFHPKFRLSVRGRHVSRRCFVESRTKLILPA
LGALTGGLDAGHGEIRRVMGSGASALLPVAGRLLRFPLA

NBRC No.	clone name	start	stop	length(bp)
G18-001-001	SP1FE13L00045B07	799	36,680	35,882
G18-001-155	SP1FE13L00045F09	3,499,710	18,843	33,956

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.