CDS Information : SJA_C1-00280

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Sphingobium japonicum UT26S (= NBRC 101211) chromosome1	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Sphingobium japonicum UT26S (= NBRC 101211)
Replicon	chromosome1
Start / Stop / Direction	28,108 / 27,467 / -
Location	complement(27467..28108)
Type	CDS
Length	642 bp (213 aa)

Product	putative S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division
Gene name	gidB
Functional category	Cell envelope and cellular processes - cell division
EC number
Note
KEGG pathway
Sequence feature
References

BLASTP Database:UniProtKB:8.8 show BLAST table	1 E=6e-78 Q1NDD9_9SPHN Ribosomal RNA small subunit methyltransferase G 16S rRNA 7-methylguanosine methyltransferase Alignment 2 E=2e-51 Q1GP62_SPHAL Ribosomal RNA small subunit methyltransferase G 16S rRNA 7-methylguanosine methyltransferase 16S rRNA 7-methylguanosine methyltransferase by acc 3 E=2e-46 GIDB_ZYMMO Ribosomal RNA small subunit methyltransferase G 16S rRNA 7-methylguanosine methyltransferase 16S rRNA 7-methylguanosine methyltransferase by acc 4 E=2e-43 Q2GC39_NOVAD Ribosomal RNA small subunit methyltransferase G 16S rRNA 7-methylguanosine methyltransferase 16S rRNA 7-methylguanosine methyltransferase by acc 5 E=2e-42 Q2N6I7_9SPHN Ribosomal RNA small subunit methyltransferase G 16S rRNA 7-methylguanosine methyltransferase 16S rRNA 7-methylguanosine methyltransferase by acc
HAMAP Database:HAMAP:20061004	MF_00074   GIDB
InterPro Database:interpro:16.0	IPR003682 Glucose inhibited division protein (Family) PF02527   GidB PD004441   Q89WP6_BRAJA_Q89WP6; TIGR00138   gidB: methyltransferase GidB
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	213 amino acids
molecular mass	23,457.77 Da
pI	7.86
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 13.6 (29aa) 8.9 (19aa) 8.9 (19aa) 6.6 (14aa) 1.9 (4aa) 2.8 (6aa) 4.7 (10aa) 1.4 (3aa) 7 (15aa) 5.2 (11aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 4.2 (9aa) 0 (0aa) 2.8 (6aa) 2.8 (6aa) 0.9 (2aa) 2.8 (6aa) 1.9 (4aa) 10.3 (22aa) 6.1 (13aa) 7 (15aa)

>SJA_C1-00280 putative S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division
GTGACGGAGGAAGATGCGCGGCTATGGCTGCAAACCCGGTTCGATGTTCCACGTGGAACA
TGGGACCGGCTGGAGCGCTATGTCGCCGTGATCCTGGATGAGATGGGACGACAAAATCTC
ATCGCGGAATCCACCCGTCCGCATATCTGGGCGCGGCACATCGTCGATAGCGCCCAGCTG
ATCCCGCTCGCCGACAATGCGGGGGATGGGAAATGGATCGATCTGGGATCGGGCGCGGGC
CTGCCCGGCATCGTGGTCGCGATTCTCACCCGGCGTCCTGTCGAGATGGTGGAATCGCGG
CGCAAGCGTATCGACTTCCTGAACGACGTCATCGCCGAACTGGGCTTGCCCAATGCAGCG
GTCTTCGGCGGACGCGTGGAGAGCGTGCCGACCGCCGCTGCGGCCGTCATCAGCGCCCGC
GCCTATGCCCCATTGCCCAAGTTGCTCGAATCGGCCGAGCATCTGGCCGATGAAAAGACC
ATCTGGGTGCTGCCAAAAGGACGAAATGCGCAGAATGAACTGGAGGCGGCGACTCGATCA
TGGCAAGGTGCGTTCCACGTGGAACGCAGCGTGACCGATGCCGACAGCGCCATCATCGTC
GCGCAGGCGGTTCGATCCGTCAGGAGGAAGGGCCGAGGATGA


>SJA_C1-00280 putative S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division
MTEEDARLWLQTRFDVPRGTWDRLERYVAVILDEMGRQNLIAESTRPHIWARHIVDSAQL
IPLADNAGDGKWIDLGSGAGLPGIVVAILTRRPVEMVESRRKRIDFLNDVIAELGLPNAA
VFGGRVESVPTAAAAVISARAYAPLPKLLESAEHLADEKTIWVLPKGRNAQNELEAATRS
WQGAFHVERSVTDADSAIIVAQAVRSVRRKGRG

NBRC No.	clone name	start	stop	length(bp)
G18-001-001	SP1FE13L00045B07	799	36,680	35,882
G18-001-002	SP1FE13L00052E04	23,769	57,762	33,994

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.