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CDS Information : SJA_C1-22960

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Sphingobium japonicum UT26S (= NBRC 101211) chromosome1

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Overview 
Genome

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Organism Sphingobium japonicum UT26S (= NBRC 101211)
Replicon chromosome1
Start / Stop / Direction 2,312,964 / 2,312,278 / -
Location complement(2312278..2312964)
Type CDS
Length 687 bp (228 aa)

close this sectionAnnotation

Product phosphoglycerate mutase
Gene name gpm
Functional category Intermedialy metabolism
- metabolism of carbohydrates and related molecules
- - main glycolytic pathways
EC number 5.4.2.1
Note
KEGG pathway
Sequence feature
References

close this sectionComputational search results

BLASTP
Database:UniProtKB:8.8
1E=1e-117Q1NE46_9SPHN2,3-bisphosphoglycerate-dependent phosphoglycerate mutaseAlignment
2E=1e-103Q1GP88_SPHAL2,3-bisphosphoglycerate-dependent phosphoglycerate mutaseby acc
3E=1e-101GPMA_ZYMMO2,3-bisphosphoglycerate-dependent phosphoglycerate mutaseAlignment
4E=2e-98Q2G373_NOVAD2,3-bisphosphoglycerate-dependent phosphoglycerate mutaseby acc
5E=2e-88Q2N682_9SPHN2,3-bisphosphoglycerate-dependent phosphoglycerate mutaseby acc
HAMAP
Database:HAMAP:20061004
 [2-225]  46.365 MF_01039
MF_01039   GPMA
InterPro
Database:interpro:16.0
IPR001345 Phosphoglycerate/bisphosphoglycerate mutase (Active_site)
 [6-15]  PS00175
PS00175   PG_MUTASE
IPR001345 Phosphoglycerate/bisphosphoglycerate mutase (Family)
 [6-15]  PS00175
PS00175   PG_MUTASE
IPR005952 Phosphoglycerate mutase 1 (Family)
 [2-228]  4.4e-145 TIGR01258
TIGR01258   pgm_1: phosphoglycerate mutase
 [1-217]  1.1e-127 PTHR11931
PTHR11931   PHOSPHOGLYCERATE MUTASE
IPR013078 Phosphoglycerate mutase (Domain)
 [3-186]  5.7e-45 PF00300
PF00300   PGAM
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 228 amino acids
molecular mass 25,988.40 Da
pI 5.72
aa composition
AlaValLeuIlePheTrpProMetGlySer
7.5
(17aa)
5.3
(12aa)
11.4
(26aa)
5.3
(12aa)
1.8
(4aa)
3.1
(7aa)
6.1
(14aa)
0.9
(2aa)
6.6
(15aa)
4.8
(11aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
6.1
(14aa)
0.4
(1aa)
3.1
(7aa)
2.2
(5aa)
3.1
(7aa)
5.7
(13aa)
2.2
(5aa)
8.3
(19aa)
7.9
(18aa)
8.3
(19aa)

open this sectionSequence