CDS Information : SJA_C1-23150

Display	1000bp 10000bp 100000bp Clone

Sphingobium japonicum UT26S (= NBRC 101211) chromosome1	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Sphingobium japonicum UT26S (= NBRC 101211)
Replicon	chromosome1
Start / Stop / Direction	2,331,173 / 2,331,829 / +
Location	2331173..2331829
Type	CDS
Length	657 bp (218 aa)

Product	glutathione S-transferase
Gene name	gst
Functional category	Intermedialy metabolism - metabolism of coenzymes
EC number	2.5.1.18
Note
KEGG pathway
Sequence feature
References

BLASTP Database:UniProtKB:8.8 show BLAST table	1 E=1e-100 Q1N7D3_9SPHN Glutathione S-transferase-like protein Alignment 2 E=5e-80 Q1M5S5_RHIL3 Putative glutathione-S-transferase protein Alignment 3 E=1e-69 Q26JQ2_XANP2 (Q26JQ2) Glutathione S-transferase not found in DB 4 E=2e-69 Q1LJV3_RALME Glutathione S-transferase Alignment 5 E=1e-67 Q474P0_RALEJ Glutathione S-transferase, N-terminal by acc
HAMAP	No significant hit
InterPro Database:interpro:16.0	IPR004045 Glutathione S-transferase, N-terminal (Domain) PF02798   GST_N IPR010987 Glutathione S-transferase, C-terminal-like (Domain) SSF47616   Glutathione S-transferase (GST), C-terminal domain IPR012335 Thioredoxin fold (Domain) G3DSA:3.40.30.10   no description IPR012336 Thioredoxin-like fold (Domain) SSF52833   Thioredoxin-like
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	218 amino acids
molecular mass	24,714.10 Da
pI	4.64
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 11.5 (25aa) 6 (13aa) 11.5 (25aa) 4.6 (10aa) 3.2 (7aa) 3.7 (8aa) 5 (11aa) 2.3 (5aa) 4.6 (10aa) 8.3 (18aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 3.2 (7aa) 1.8 (4aa) 2.3 (5aa) 0.9 (2aa) 3.2 (7aa) 2.8 (6aa) 2.8 (6aa) 6.9 (15aa) 4.1 (9aa) 11.5 (25aa)

>SJA_C1-23150 glutathione S-transferase
ATGGCCGAAGCCGAACTGACCATTTCCAGCAAGACTTATTCGTCCTGGTCCCTGCGCGGA
TGGCTGTTGTGCCGCATGGCGGGCCTGAAAGTCGTGGAAAAGACGATTGCTCTCGATGAT
CCTGAAAACCGGGCGGAATTGCTGCTGTTGTCGCCTTCCGTGCTGGTGCCTCGCCTGACC
CATGAGGGGGCGAGCGTGTGGGACACGCTCGCCATTGCTGAATATCTGCATGAACTTTAT
CCGCATGCCGGCCTTTATCCCGAGGAGCGGATCGCGCGGGCGCATTGCCGTTCGGTTTCG
GGCGAAATCCACTCCGGCTTCATCAACCTGCGCTCCGCCCTGCCCATGAACCTGAAGGTC
CGGCATGAGAAGTTCCCCGTCTTTTCCGGGGCCAGGCAGGATATAGAGCGCATCGAGGAA
ATCTGGACCGAATGCCTGAGCGCCTATGGCGGGCCATGGCTGTTCGGGGAAAAGCCGACC
GTGGCCGACGCCATGTTCGCCCCTGTGGCGCAACGTTTCCTGAGTTATGCGGTGGCGCTG
TCGGCGCCTTCGGCCGCCTATTGCAACTGGAGCAACGACTGGGATCTGATGCGCGAGTGG
ATCGACGCCGCTCGCCGGGAAGAGGACGAGGTCGAGGAACTGGAAGTCGAGTTCTAA


>SJA_C1-23150 glutathione S-transferase
MAEAELTISSKTYSSWSLRGWLLCRMAGLKVVEKTIALDDPENRAELLLLSPSVLVPRLT
HEGASVWDTLAIAEYLHELYPHAGLYPEERIARAHCRSVSGEIHSGFINLRSALPMNLKV
RHEKFPVFSGARQDIERIEEIWTECLSAYGGPWLFGEKPTVADAMFAPVAQRFLSYAVAL
SAPSAAYCNWSNDWDLMREWIDAARREEDEVEELEVEF

NBRC No.	clone name	start	stop	length(bp)
G18-001-102	SP1FE13L00051A11	2,309,869	2,342,701	32,833

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.