CDS Information : SJA_C1-27720

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Sphingobium japonicum UT26S (= NBRC 101211) chromosome1	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Sphingobium japonicum UT26S (= NBRC 101211)
Replicon	chromosome1
Start / Stop / Direction	2,773,881 / 2,773,327 / -
Location	complement(2773327..2773881)
Type	CDS
Length	555 bp (184 aa)

Product	conserved hypothetical protein
Gene name
Functional category	similar to unknown proteins
EC number
Note	Metal-dependent phosphohydrolase, HD subdomain
KEGG pathway
Sequence feature
References

BLASTP Database:UniProtKB:8.8 show BLAST table	1 E=2e-36 Q1GR44_SPHAL Putative uncharacterized protein Alignment 2 E=3e-34 Q2G3M9_NOVAD Putative uncharacterized protein Alignment 3 E=2e-16 Q26DL4_9BACT Metal-dependent phosphohydrolase by acc 4 E=2e-12 Q1JX20_DESAC Putative uncharacterized protein Alignment 5 E=2e-11 Q1XM11_CYTJO (Q1XM11) Metal-dependent phosphohydrolase, HD subdomain not found in DB
HAMAP	No significant hit
InterPro	No significant hit
SignalP	No significant hit
TMHMM	Transmembrane 3
SOSUI	Transmembrane 3

size of protein	184 amino acids
molecular mass	19,998.46 Da
pI	8.86
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 13.6 (25aa) 10.3 (19aa) 12.5 (23aa) 2.7 (5aa) 4.3 (8aa) 1.6 (3aa) 2.2 (4aa) 6 (11aa) 7.6 (14aa) 5.4 (10aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 4.3 (8aa) 1.6 (3aa) 3.8 (7aa) 4.3 (8aa) 2.2 (4aa) 2.7 (5aa) 0.5 (1aa) 6.5 (12aa) 5.4 (10aa) 2.2 (4aa)

>SJA_C1-27720 conserved hypothetical protein
ATGACTGTCGCGAAAAAGGGGGAGGGGGAAAAGATGGACGCGACGAATGCTCCGGTGCCC
AATGCGATCCACCTGCTGCGCACGGCGGCGCAGACCAATATGCAATTGAGCCAGATGGCC
GATCAGAAGGCCAACATGCTGATCGGCGCGTCGATGGTGATCTTCACGCTTTGCGTGGCG
CAATTGCGGTCGGGCGCGCTGGTCTGGCCGGTGGCGGTGCTGGCGGTGGGGGTGTTCCTG
GCCGCGACCTGCGCGATCATGGCCGTGCTGCCCAGCGTCGGCCGGTCGCGCGGGAATGTG
GGAGCGGACGACAATCTGCTGTTCTTCGGCATCTTCACCAGCCTCAGCGAGGCGGAGTTC
AGCGACAGGATGATGGCCCTGGTGTCGGACGACGACGCGCTGTGCCGGGCGATGCTGCGC
GACATGTACCAGAACGGGCAGGTGCTCCAGCGGCGGAAATATCGCTGGCTGGGTTATGCC
TACCGGCTGTTCCTGGCGGGCGTAGTGACGAGTTTTGTCGCGCTGGTGGTGGATTTGGGG
CTGGGGTGGCGTTGA


>SJA_C1-27720 conserved hypothetical protein
MTVAKKGEGEKMDATNAPVPNAIHLLRTAAQTNMQLSQMADQKANMLIGASMVIFTLCVA
QLRSGALVWPVAVLAVGVFLAATCAIMAVLPSVGRSRGNVGADDNLLFFGIFTSLSEAEF
SDRMMALVSDDDALCRAMLRDMYQNGQVLQRRKYRWLGYAYRLFLAGVVTSFVALVVDLG
LGWR

NBRC No.	clone name	start	stop	length(bp)
G18-001-121	SP1FE13L00050C07	2,739,384	2,776,343	36,960
G18-001-122	SP1FE13L00046F02	2,762,780	2,799,331	36,552

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.