CDS Information : SJA_C1-27770

Display	1000bp 10000bp 100000bp Clone

Sphingobium japonicum UT26S (= NBRC 101211) chromosome1	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Sphingobium japonicum UT26S (= NBRC 101211)
Replicon	chromosome1
Start / Stop / Direction	2,778,780 / 2,779,553 / +
Location	2778780..2779553
Type	CDS
Length	774 bp (257 aa)

Product	hypothetical protein
Gene name
Functional category	no similarity
EC number
Note
KEGG pathway
Sequence feature
References

BLASTP Database:UniProtKB:8.8	No significant hit
HAMAP	No significant hit
InterPro Database:interpro:16.0	IPR006311 Twin-arginine translocation pathway, signal sequence (Conserved_site) TIGR01409   TAT_signal_seq: Tat (twin-arginine transloc IPR006311 Twin-arginine translocation pathway signal (Domain) TIGR01409   TAT_signal_seq: Tat (twin-arginine transloc
SignalP	Bacteria, Gram-negative
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	257 amino acids
molecular mass	27,587.56 Da
pI	7.68
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 10.5 (27aa) 7.8 (20aa) 8.2 (21aa) 6.6 (17aa) 3.5 (9aa) 0.4 (1aa) 3.5 (9aa) 3.5 (9aa) 8.6 (22aa) 5.8 (15aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 8.6 (22aa) 0 (0aa) 5.1 (13aa) 2.7 (7aa) 1.2 (3aa) 6.2 (16aa) 0.8 (2aa) 5.4 (14aa) 6.6 (17aa) 5.1 (13aa)

>SJA_C1-27770 hypothetical protein
ATGACCGACAGCCAGGATGCCGAAATGCGAACCCACGACCGCCGGAACGCTTTGGCGGCG
ATGGCCGCCATTGCCGCTGGCGTCGGTTTCGCGTCGGAAGCGTCCTCGCAGATCATCAAA
CGCACGGATTTGGGAGGGATCGATCCTTTCGACCCCACCAATTTCGTGCCTATCGAGCCG
ATTCAGGTTCCCAAGGTCAAGATATTCGACGGAACGACCGAGGCGGAAGTCTATTGGGCA
TCGCTGGCAGAAAAGAAAAGACGCGCCCTGATGTCGAATCAGGATGCGAAGGTCACTGTC
GAAAAGGTGAATGACGGCGGTGGCCTGACATTCCTGACGGGCGCGCTGACCGGCGAAAAG
GGCCGCTATCGCGTCACTGTCGACTATATGCGGTTCATGCAGGACAGCATCATGATGGAC
GGGAAAACGGCCGGCCGCGCAAAAGTAGGCGTGGGACTTCGCGTGATCGCGAACATCAAC
ACGAAGAAAGCCGGACTGAATCTGAACGGCCTGTTCCCGATTGGCTTCAACGCTTCGACC
GATGCGCTTTCGGGAGATTTGGAGGTCAAGACCATCGGATTGAATTCGGATCAAATCTCC
AAACTGATCACGACTCCATCGGAATTGAACCAGACGTCGATCACCAAGGCGCTTGAGGCG
ATGGGAGCCGTTCGCGTCCTCGTTGATGCCGAAACCACGGAAAGCGTCCCTCATATATTG
GCGGTCAGCCGGAATGTGCGGAATACGCCCGATCTGATCAAATTCCTCGGTTGA


>SJA_C1-27770 hypothetical protein
MTDSQDAEMRTHDRRNALAAMAAIAAGVGFASEASSQIIKRTDLGGIDPFDPTNFVPIEP
IQVPKVKIFDGTTEAEVYWASLAEKKRRALMSNQDAKVTVEKVNDGGGLTFLTGALTGEK
GRYRVTVDYMRFMQDSIMMDGKTAGRAKVGVGLRVIANINTKKAGLNLNGLFPIGFNAST
DALSGDLEVKTIGLNSDQISKLITTPSELNQTSITKALEAMGAVRVLVDAETTESVPHIL
AVSRNVRNTPDLIKFLG

NBRC No.	clone name	start	stop	length(bp)
G18-001-122	SP1FE13L00046F02	2,762,780	2,799,331	36,552

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.