CDS Information : SJA_C1-32210

Display	1000bp 10000bp 100000bp Clone

Sphingobium japonicum UT26S (= NBRC 101211) chromosome1	Legend Jump
Overview  Genome Clone

Center position		change
ID		change
Gene name		change

Organism	Sphingobium japonicum UT26S (= NBRC 101211)
Replicon	chromosome1
Start / Stop / Direction	3,205,034 / 3,204,390 / -
Location	complement(3204390..3205034)
Type	CDS
Length	645 bp (214 aa)

Product	glutathione S-transferase
Gene name	gst
Functional category	Intermedialy metabolism - metabolism of coenzymes
EC number	2.5.1.18
Note
KEGG pathway
Sequence feature
References

BLASTP Database:UniProtKB:8.8 show BLAST table	1 E=4e-57 Q1MFM6_RHIL3 Putative glutathione S-transferase Alignment 2 E=6e-57 Q92NV7_RHIME Putative glutathione S-transferase Alignment 3 E=5e-56 Q356H2_9BRAD (Q356H2) Similar to Glutathione S-transferase not found in DB 4 E=6e-55 Q98FH4_RHILO Mll3775 protein Alignment 5 E=2e-54 Q143F0_BURXL Putative glutathione S-transferase Alignment
HAMAP	No significant hit
InterPro Database:interpro:16.0	IPR004045 Glutathione S-transferase, N-terminal (Domain) PF02798   GST_N IPR004046 Glutathione S-transferase, C-terminal (Domain) PF00043   GST_C IPR010987 Glutathione S-transferase, C-terminal-like (Domain) SSF47616   Glutathione S-transferase (GST), C-terminal domain G3DSA:1.20.1050.10   no description IPR012335 Thioredoxin fold (Domain) G3DSA:3.40.30.10   no description IPR012336 Thioredoxin-like fold (Domain) SSF52833   Thioredoxin-like
SignalP	No significant hit
TMHMM	No significant hit
SOSUI	No significant hit

size of protein	214 amino acids
molecular mass	24,385.23 Da
pI	5.8
aa composition	Ala Val Leu Ile Phe Trp Pro Met Gly Ser 14 (30aa) 4.7 (10aa) 10.3 (22aa) 4.7 (10aa) 4.7 (10aa) 2.8 (6aa) 8.4 (18aa) 4.2 (9aa) 5.6 (12aa) 2.8 (6aa) Thr Cys Asn Gln Tyr Lys His Arg Asp Glu 2.8 (6aa) 0.9 (2aa) 0.5 (1aa) 0.9 (2aa) 3.7 (8aa) 2.8 (6aa) 1.4 (3aa) 10.3 (22aa) 7 (15aa) 7.5 (16aa)

>SJA_C1-32210 glutathione S-transferase
ATGATTCTCTATTACCACCCCCTCTCCTCCTGCAGTTGGAAGGTGCTGATCGCCCTTTAC
GAGAACGGCACCCCGTTCGAGCCGCGCATGCTGGACGACCCGGCCGTGGCGGAGGCGTGG
CTGGCGCTGTGGCCGCTGGGGAAGTTCCCGGTGCTGCGGGACGAGACGCGGGACAGGACG
GTCGCGGAAACCAGCATCATCATAGAATATCTGGGACGGCATCGTCCGGGGCCCTTCCGG
CCGATTCCCGAAGATGCCGACGCGGCGCTGGAGGTTCGGCTGATGGACCGGCTGTTCGAC
ATCTATGTGATGACGCCGATGCAGGCGATCGTCGCCGACAAGATCCGGCCCCAGGGCGTC
GCCCGCGATTCCCATGGCGTGGGGGAAGCGCGGCGGATGCTGGGCAAGGCCTATGCGCTG
CTGGAGGCGCGGATGGCGGGACGGCGCTGGGCGGCGGGGGACGATTTCACCCTGGCCGAT
TGCGCGGCGGCGCCGGCCCTGTTCTATGCCGACAAGATCGAGCCGATGCGGGGCGGGTTT
CCGGCACTGCGCGCCTATCTTGAACGGCTGGAGGCGCGGGAGAGCTTCGCGCGGGTGCTG
CGGGAAAAGGAGCCGTGGTGGCCCATGTTTCCCTTCGCGGATTAG


>SJA_C1-32210 glutathione S-transferase
MILYYHPLSSCSWKVLIALYENGTPFEPRMLDDPAVAEAWLALWPLGKFPVLRDETRDRT
VAETSIIIEYLGRHRPGPFRPIPEDADAALEVRLMDRLFDIYVMTPMQAIVADKIRPQGV
ARDSHGVGEARRMLGKAYALLEARMAGRRWAAGDDFTLADCAAAPALFYADKIEPMRGGF
PALRAYLERLEARESFARVLREKEPWWPMFPFAD

NBRC No.	clone name	start	stop	length(bp)
G18-001-141	SP1FE13L00050H02	3,185,439	3,213,884	28,446
G18-001-142	SP1FE13L00003C07	3,203,699	3,236,866	33,168

We have been distributing copies of the microbial genomic DNA clones constructed during the course of each of the genomic DNA sequencing projects.
You can find more detailed information at http://www.nbrc.nite.go.jp/e/mdna-e.html.