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CDS Information : SLG_14580

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Sphingobium sp. SYK-6 (= NBRC 103272) chromosome

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Overview 
Genome

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Organism Sphingobium sp. SYK-6 (= NBRC 103272)
Replicon chromosome
Start / Stop / Direction 1,585,628 / 1,586,887 / +
Location 1585628..1586887
Type CDS
Length 1,260 bp (419 aa)

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Product aspartate kinase
Gene name lysC
Functional category Metabolism
- [E] Amino acid transport and metabolism
EC number 2.7.2.4
Note
KEGG pathway
Sequence feature
References

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=0Q1NBF6_9SPHNAspartokinaseAlignment
2E=0Q1GR69_SPHALAspartokinaseAlignment
3E=0A5VEX5_SPHWWAspartokinaseAlignment
4E=1e-178Q2G334_NOVADAspartokinaseAlignment
5E=1e-176Q2N5P0_ERYLHAspartokinaseAlignment
HAMAP No significant hit
InterPro
Database:interpro:26.0
IPR001048 Aspartate/glutamate/uridylate kinase (Domain)
 [3-229]  5.5e-44 PF00696
PF00696   AA_kinase
 [1-247]  1.6e-53 SSF53633
SSF53633   Carbamate kinase-like
 [1-245]  3e-35 G3DSA:3.40.1160.10
G3DSA:3.40.1160.10   no description
IPR001341 Aspartate kinase region (Domain)
 [5-13]  PS00324
PS00324   ASPARTOKINASE
 [1-412]  9.9e-169 TIGR00657
TIGR00657   asp_kinases: aspartate kinase
IPR002912 Amino acid-binding ACT (Domain)
 [273-334]  1.6e-10 PF01842 [354-407]  2.6e-09 PF01842
PF01842   ACT
IPR005260 Aspartate kinase, monofunctional class (Family)
 [1-413]  7.1e-127 TIGR00656
TIGR00656   asp_kin_monofn: asparate kinase, monof
IPR018042 Aspartate kinase, conserved site (Conserved_site)
 [5-13]  PS00324
PS00324   ASPARTOKINASE
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 419 amino acids
molecular mass 44,985.42 Da
pI 4.64
aa composition
AlaValLeuIlePheTrpProMetGlySer
11.9
(50aa)
11.2
(47aa)
6.7
(28aa)
7.2
(30aa)
1.9
(8aa)
0.5
(2aa)
2.9
(12aa)
3.8
(16aa)
7.6
(32aa)
6.7
(28aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
5.7
(24aa)
0.5
(2aa)
2.1
(9aa)
3.1
(13aa)
1.4
(6aa)
4.5
(19aa)
1.2
(5aa)
6.2
(26aa)
6.4
(27aa)
8.4
(35aa)

open this sectionSequence