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CDS Information : SLG_23650

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close this sectionGenomic map

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Sphingobium sp. SYK-6 (= NBRC 103272) chromosome

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Overview 
Genome

close this sectionLocation

Organism Sphingobium sp. SYK-6 (= NBRC 103272)
Replicon chromosome
Start / Stop / Direction 2,550,521 / 2,548,623 / -
Location complement(2548623..2550521)
Type CDS
Length 1,899 bp (632 aa)

close this sectionAnnotation

Product putative M2 family peptidase
Gene name
Functional category Unannotated
EC number
Note
KEGG pathway
Sequence feature
References Merops:M02
Family/Domain:IPR001548

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=0Q1GVZ5_SPHALPeptidyl-dipeptidase AAlignment
2E=0Q2N9R8_ERYLHZinc-dependent metallopeptidaseAlignment
3E=0A5V9Q7_SPHWWPeptidyl-dipeptidase AAlignment
4E=0Q1NDY3_9SPHNZinc-dependent metallopeptidaseAlignment
5E=0A5P862_9SPHNZinc-dependent metallopeptidaseAlignment
HAMAP No significant hit
InterPro
Database:interpro:26.0
IPR001548 Peptidase M2, peptidyl-dipeptidase A (Family)
 [230-257]  6.5e-29 PR00791 [265-286]  6.5e-29 PR00791 [528-556]  6.5e-29 PR00791
PR00791   PEPDIPTASEA
 [30-632]  2.6e-153 PF01401
PF01401   Peptidase_M2
IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 (Domain)
 [121-632]  6.6e-135 G3DSA:1.10.1370.10
G3DSA:1.10.1370.10   no description
SignalP
 [1-24]  1 Signal
Bacteria, Gram-negative   
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 632 amino acids
molecular mass 70,201.60 Da
pI 6.34
aa composition
AlaValLeuIlePheTrpProMetGlySer
12.5
(79aa)
4.4
(28aa)
8.2
(52aa)
4.3
(27aa)
4.3
(27aa)
2.7
(17aa)
5.7
(36aa)
3
(19aa)
8.4
(53aa)
4.1
(26aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
5.2
(33aa)
0.9
(6aa)
2.8
(18aa)
4.6
(29aa)
4
(25aa)
5.2
(33aa)
2.1
(13aa)
5.5
(35aa)
7.4
(47aa)
4.6
(29aa)

open this sectionSequence