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CDS Information : SLG_33060

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Sphingobium sp. SYK-6 (= NBRC 103272) chromosome

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Overview 
Genome

close this sectionLocation

Organism Sphingobium sp. SYK-6 (= NBRC 103272)
Replicon chromosome
Start / Stop / Direction 3,574,335 / 3,574,976 / +
Location 3574335..3574976
Type CDS
Length 642 bp (213 aa)

close this sectionAnnotation

Product glutathione S-transferase
Gene name
Functional category Cellular processes and signaling
- [O] Posttranslational modification, protein turnover, chaperones
EC number 2.5.1.18
Note
KEGG pathway
Sequence feature
References Uniprot:Q9RBP3 Pubmed:10715003

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=4e-76A3VND0_9PROTGlutathione S-transferaseAlignment
2E=2e-75Q1NAN7_9SPHNGlutathione S-transferase proteinAlignment
3E=1e-74Q1GPD9_SPHALGlutathione S-transferase-like proteinAlignment
4E=4e-69C6AZN9_RHILSGlutathione S-transferase domain proteinAlignment
5E=7e-67A6X0F3_OCHA4Glutathione S-transferase domain proteinAlignment
HAMAP No significant hit
InterPro
Database:interpro:26.0
IPR004045 Glutathione S-transferase, N-terminal (Domain)
 [7-76]  9.6e-15 PF02798
PF02798   GST_N
 [2-82]  19.806 PS50404
PS50404   GST_NTER
IPR010987 Glutathione S-transferase, C-terminal-like (Domain)
 [81-201]  6.5e-22 SSF47616
SSF47616   Glutathione S-transferase (GST), C-terminal domain
IPR012335 Thioredoxin fold (Domain)
 [5-96]  5.1e-22 G3DSA:3.40.30.10
G3DSA:3.40.30.10   no description
IPR012336 Thioredoxin-like fold (Domain)
 [2-86]  5.3e-25 SSF52833
SSF52833   Thioredoxin-like
IPR017933 Glutathione S-transferase/chloride channel, C-terminal (Domain)
 [86-213]  10.424 PS50405
PS50405   GST_CTER
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 213 amino acids
molecular mass 23,665.91 Da
pI 4.89
aa composition
AlaValLeuIlePheTrpProMetGlySer
14.6
(31aa)
5.2
(11aa)
6.6
(14aa)
4.2
(9aa)
4.2
(9aa)
1.4
(3aa)
6.1
(13aa)
4.2
(9aa)
7.5
(16aa)
3.8
(8aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
5.2
(11aa)
1.9
(4aa)
1.9
(4aa)
5.2
(11aa)
6.1
(13aa)
2.8
(6aa)
0.9
(2aa)
6.6
(14aa)
5.2
(11aa)
6.6
(14aa)

open this sectionSequence