CDS Information : SLG_33060
open/close allGenomic map
| Information storage and processing |
| [J] Translation, ribosomal structure and biogenesis |
| [A] RNA processing and modification |
| [K] Transcription |
| [L] Replication, recombination and repair |
| [B] Chromatin structure and dynamics |
| Cellular processes and signaling |
| [D] Cell cycle control, cell division, chromosome partitioning |
| [O] Posttranslational modification, protein turnover, chaperones |
| [Y] Nuclear structure |
| [V] Defense mechanisms |
| [T] Signal transduction mechanisms |
| [M] Cell wall/membrane/envelope biogenesis |
| [N] Cell motility |
| [Z] Cytoskeleton |
| [W] Extracellular structures |
| [U] Intracellular trafficking, secretion, and vesicular transport |
| Metabolism |
| [C] Energy production and conversion |
| [G] Carbohydrate transport and metabolism |
| [E] Amino acid transport and metabolism |
| [F] Nucleotide transport and metabolism |
| [H] Coenzyme transport and metabolism |
| [I] Lipid transport and metabolism |
| [P] Inorganic ion transport and metabolism |
| [Q] Secondary metabolites biosynthesis, transport and catabolism |
| Poorly characterized |
| [R] General function prediction only |
| [S] Function unknown |
| Unannotated |
Location
| Organism |
Sphingobium sp. SYK-6 (= NBRC 103272) |
| Replicon |
chromosome |
| Start / Stop / Direction |
3,574,335 / 3,574,976 / + |
| Location |
3574335..3574976 |
| Type |
CDS |
| Length |
642 bp (213 aa) |
Annotation
| Product |
glutathione S-transferase |
| Gene name |
|
| Functional category |
Cellular processes and signaling
- [O] Posttranslational modification, protein turnover, chaperones |
| EC number |
2.5.1.18 |
| Note |
|
| KEGG pathway |
|
| Sequence feature |
|
| References |
Uniprot:Q9RBP3 Pubmed:10715003 |
Computational search results
BLASTP
Database:UniProtKB:2010_04
|
|
| HAMAP |
No significant hit |
InterPro
Database:interpro:26.0
|
|
| SignalP |
No significant hit |
| TMHMM |
No significant hit |
| SOSUI |
No significant hit |
Calculated information (Amino acid sequence)
| size of protein |
213 amino acids |
| molecular mass |
23,665.91 Da |
| pI |
4.89 |
| aa composition |
| Ala | Val | Leu | Ile | Phe | Trp | Pro | Met | Gly | Ser |
|---|
14.6
(31aa) | 5.2
(11aa) | 6.6
(14aa) | 4.2
(9aa) | 4.2
(9aa) | 1.4
(3aa) | 6.1
(13aa) | 4.2
(9aa) | 7.5
(16aa) | 3.8
(8aa) |
| Thr | Cys | Asn | Gln | Tyr | Lys | His | Arg | Asp | Glu |
|---|
5.2
(11aa) | 1.9
(4aa) | 1.9
(4aa) | 5.2
(11aa) | 6.1
(13aa) | 2.8
(6aa) | 0.9
(2aa) | 6.6
(14aa) | 5.2
(11aa) | 6.6
(14aa) |
|
Sequence
>SLG_33060 glutathione S-transferase
ATGACTGCTGCAATCCAGTTCTACACGAACCCCATGTCGCGCGGACAGATCATAAGATGG
ATGCTCGAGGAACTCGGGCAGCCCTATGAGACTCATCTGCTCGATTATGCGGGAAGCATG
AAATCGCCCGACTATCTCGCGCTCAACCCGATGGGGAAGGTCCCGGCCATCGTTCATGAT
GGCAAGATCGTGACCGAATGTGCGGCGATCTGCGTCTATTTGGCGGAGTGCTTTCCCGAG
GCCTCGCTCGGTCCCCGGCCGGAGGAGCGCGCGGATTATTATCGCTGGCTGTTCTTCGCG
GCCGGGCCGGTCGAAGCCGCTGTCACCAATCAGGCGGCGGGCTTCACGGTCTCGGAGGAA
CGGGCGCGGATGTTTGGCTATGGCACTTACGACCTGGCGATGCAGACGCTCGAAAGCGCC
GTCACGGGGCGTGATTATGTCTGCGGGCCCCGCTTCACGGCGGCCGACGTCTATGTGGGT
TCGCAGATCGACTGGGGCCTGCAGTTCGGGACCATGCCGGACCGGCCGGCCTTCCGTGCC
TATGCCGAGCAGCTGCGGGCAAGGCCTGCTTATCAGCGCGCCAAGGACATCGACAATGCG
CTCATCGCGCAGATGAAAGGCGCAGCGGAGAAGCAATCATAG
>SLG_33060 glutathione S-transferase
MTAAIQFYTNPMSRGQIIRWMLEELGQPYETHLLDYAGSMKSPDYLALNPMGKVPAIVHD
GKIVTECAAICVYLAECFPEASLGPRPEERADYYRWLFFAAGPVEAAVTNQAAGFTVSEE
RARMFGYGTYDLAMQTLESAVTGRDYVCGPRFTAADVYVGSQIDWGLQFGTMPDRPAFRA
YAEQLRARPAYQRAKDIDNALIAQMKGAAEKQS
![[7-76] 9.6e-15 PF02798](/dogan/img/H.gif "[7-76] 9.6e-15 PF02798"){kind=small}
![[2-82] 19.806 PS50404](/dogan/img/M.gif "[2-82] 19.806 PS50404"){kind=small}
![[81-201] 6.5e-22 SSF47616](/dogan/img/B.gif "[81-201] 6.5e-22 SSF47616"){kind=small}
![[5-96] 5.1e-22 G3DSA:3.40.30.10](/dogan/img/X2.gif "[5-96] 5.1e-22 G3DSA:3.40.30.10"){kind=small}