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CDS Information : STK_00030

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Sulfolobus tokodaii strain 7T (= NBRC 100140T) chromosome

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Organism Sulfolobus tokodaii strain 7T (= NBRC 100140T)
Replicon chromosome
Start / Stop / Direction 8,819 / 5,970 / -
Location complement(5970..8819)
Type CDS
Length 2,850 bp (949 aa)

close this sectionAnnotation

Product putative ATP-dependent helicase
Gene name
Functional category Genetic Information Processing
- Replication and Repair
EC number 3.6.4.-
Note old_id=ST0003 old_product=949aa long hypothetical protein
KEGG pathway
Sequence feature
References Family/Domain:IPR011545
Family/Domain:IPR001650

close this sectionComparative genome

Display BBH1e-1001e-501e-101e-3
Sulfolobus solfataricus P2Sulfolobus acidocaldarius DSM 639 (= NBRC 15157)

close this sectionRelated links to external database

UniProtQ977E4
INSDBAB64950.1 (DDBJ GenBank EMBL)
RefSeqNP_375841.1

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=0Q977E4_SULTOPutative uncharacterized protein ST0003Alignment
2E=7e-82A2BLQ0_HYPBUPredicted helicaseAlignment
3E=7e-75B1L7F7_KORCODEAD/DEAH box helicase domain proteinAlignment
4E=7e-68A1RX10_THEPDDEAD/DEAH box helicase domain proteinAlignment
5E=6e-66D3CN11_9CRENDEAD/DEAH box helicase domain proteinAlignment
HAMAP No significant hit
InterPro
Database:interpro:26.0
IPR001650 DNA/RNA helicase, C-terminal (Domain)
 [307-420]  4.50000034739347e-11 SM00490
SM00490   HELICc
 [351-419]  7.79999999999999e-10 PF00271
PF00271   Helicase_C
 [308-459]  PS51194
PS51194   HELICASE_CTER
IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal (Domain)
 [54-235]  1.2e-16 PF00270
PF00270   DEAD
IPR014001 DEAD-like helicases, N-terminal (Domain)
 [48-261]  2.00000075217457e-16 SM00487
SM00487   DEXDc
IPR014021 Helicase, superfamily 1 and 2, ATP-binding (Domain)
 [60-249]  PS51192
PS51192   HELICASE_ATP_BIND_1
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 949 amino acids
molecular mass 107,643.31 Da
pI 7.9
aa composition
AlaValLeuIlePheTrpProMetGlySer
4
(38aa)
9.2
(87aa)
10.2
(97aa)
8.4
(80aa)
4.6
(44aa)
0.7
(7aa)
3.3
(31aa)
1.4
(13aa)
6
(57aa)
7.1
(67aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
4
(38aa)
1.1
(10aa)
5.6
(53aa)
2.7
(26aa)
4
(38aa)
9
(85aa)
1.4
(13aa)
4.3
(41aa)
6.4
(61aa)
6.6
(63aa)

open this sectionSequence