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CDS Information : STK_00050

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Sulfolobus tokodaii strain 7T (= NBRC 100140T) chromosome

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Organism Sulfolobus tokodaii strain 7T (= NBRC 100140T)
Replicon chromosome
Start / Stop / Direction 10,650 / 10,108 / -
Location complement(10108..10650)
Type CDS
Length 543 bp (180 aa)

close this sectionAnnotation

Product hypothetical protein
Gene name
Functional category Unclassified
- hypothetical protein
EC number
Note old_id=ST0005 old_product=180aa long hypothetical protein
KEGG pathway
Sequence feature
References

close this sectionComparative genome

Display BBH1e-1001e-501e-101e-3
Sulfolobus solfataricus P2Sulfolobus acidocaldarius DSM 639 (= NBRC 15157)
[1290] SSO1422 1e-30(125)
hypothetical protein
[1918] Saci_2053 6e-12(62.8)
hypothetical protein

close this sectionRelated links to external database

UniProtQ977E1
INSDBAB64953.1 (DDBJ GenBank EMBL)
RefSeqNP_375844.1

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=2e-98Q977E1_SULTOPutative uncharacterized protein ST0005Alignment
2E=2e-87C3MMF1_SULILPutative uncharacterized proteinAlignment
3E=3e-33C3N4F0_SULIACRISPR-associated protein Cas6Alignment
4E=4e-33C3MWM2_SULIMCRISPR-associated protein Cas6Alignment
5E=2e-27Q97YB0_SULSOPutative uncharacterized proteinAlignment
HAMAP No significant hit
InterPro
Database:interpro:26.0
IPR019267 CRISPR-associated protein Cas6 domain (Domain)
 [60-171]  0.00028 PF10040
PF10040   DUF2276
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 180 amino acids
molecular mass 20,643.06 Da
pI 9.5
aa composition
AlaValLeuIlePheTrpProMetGlySer
5
(9aa)
10
(18aa)
7.2
(13aa)
8.9
(16aa)
5
(9aa)
0.6
(1aa)
1.7
(3aa)
2.2
(4aa)
8.3
(15aa)
4.4
(8aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
4.4
(8aa)
1.7
(3aa)
3.3
(6aa)
0
(0aa)
4.4
(8aa)
8.9
(16aa)
0.6
(1aa)
8.9
(16aa)
4.4
(8aa)
10
(18aa)

open this sectionSequence