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CDS Information : STK_00260

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close this sectionGenomic map

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Sulfolobus tokodaii strain 7T (= NBRC 100140T) chromosome

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close this sectionLocation

Organism Sulfolobus tokodaii strain 7T (= NBRC 100140T)
Replicon chromosome
Start / Stop / Direction 41,135 / 40,239 / -
Location complement(40239..41135)
Type CDS
Length 897 bp (298 aa)

close this sectionAnnotation

Product putative CRISPR-associated protein Cas1
Gene name cas1
Functional category Unclassified
- Transposon-related functions
EC number
Note old_id=ST0026 old_product=298aa long conserved hypothetical protein
KEGG pathway
Sequence feature
References Family/Domain:IPR002729
Uniprot:Q97Y84 Pubmed:19427858
Uniprot:Q4J7C9 Pubmed:19239620

close this sectionComparative genome

Display BBH1e-1001e-501e-101e-3
Sulfolobus solfataricus P2Sulfolobus acidocaldarius DSM 639 (= NBRC 15157)
[1274] SSO1405 9e-119(419)
hypothetical protein
[1881] Saci_2011 8e-105(372)
hypothetical protein

close this sectionRelated links to external database

UniProtQ977B7
INSDBAB64977.1 (DDBJ GenBank EMBL)
RefSeqNP_375868.1

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=1e-172Q977B7_SULTOPutative uncharacterized protein ST0026Alignment
2E=1e-115Q97YC1_SULSOPutative uncharacterized proteinAlignment
3E=1e-115D0KV49_SULS9CRISPR-associated protein Cas1Alignment
4E=1e-115C3N4D5_SULIACRISPR-associated protein Cas1Alignment
5E=1e-115C3MWK6_SULIMCRISPR-associated protein Cas1Alignment
HAMAP No significant hit
InterPro
Database:interpro:26.0
IPR002729 Protein of unknown function DUF48 (Family)
 [7-264]  1.09999999999999e-55 PF01867
PF01867   DUF48
 [5-294]  1.50000965748778e-111 TIGR00287
TIGR00287   cas1
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 298 amino acids
molecular mass 34,524.16 Da
pI 9.97
aa composition
AlaValLeuIlePheTrpProMetGlySer
5.7
(17aa)
7.4
(22aa)
8.7
(26aa)
7.4
(22aa)
5.7
(17aa)
2
(6aa)
3
(9aa)
2.3
(7aa)
7.7
(23aa)
5.4
(16aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
2.3
(7aa)
0.3
(1aa)
4.7
(14aa)
1.7
(5aa)
5.4
(16aa)
11.1
(33aa)
1.7
(5aa)
5.4
(16aa)
3.7
(11aa)
8.4
(25aa)

open this sectionSequence