CDS Information : STMDT12_C00100
open/close allGenomic map
| Information storage and processing |
| [J] Translation, ribosomal structure and biogenesis |
| [A] RNA processing and modification |
| [K] Transcription |
| [L] Replication, recombination and repair |
| Cellular processes and signaling |
| [D] Cell cycle control, cell division, chromosome partitioning |
| [V] Defense mechanisms |
| [T] Signal transduction mechanisms |
| [M] Cell wall/membrane/envelope biogenesis |
| [N] Cell motility |
| [U] Intracellular trafficking, secretion, and vesicular transport |
| [O] Posttranslational modification, protein turnover, chaperones |
| Metabolism |
| [C] Energy production and conversion |
| [G] Carbohydrate transport and metabolism |
| [E] Amino acid transport and metabolism |
| [F] Nucleotide transport and metabolism |
| [H] Coenzyme transport and metabolism |
| [I] Lipid transport and metabolism |
| [P] Inorganic ion transport and metabolism |
| [Q] Secondary metabolites biosynthesis, transport and catabolism |
| Poorly characterized |
| [R] General function prediction only |
| [S] Function unknown |
| Unannotated |
Location
| Organism |
Salmonella enterica serovar Typhimurium T000240 |
| Replicon |
Chromosome |
| Start / Stop / Direction |
11,245 / 10,841 / - |
| Location |
complement(10841..11245) |
| Type |
CDS |
| Length |
405 bp (134 aa) |
Annotation
| Product |
hypothetical protein |
| Gene name |
|
| Functional category |
Unannotated |
| EC number |
|
| Note |
|
| KEGG pathway |
|
| Sequence feature |
|
| References |
Family/Domain:CDD-151257 |
Computational search results
BLASTP
Database:UniProtKB:2010_04
|
|
| HAMAP |
No significant hit |
InterPro
Database:interpro:26.0
|
|
| SignalP |
 ![[1-23] 1 Signal](/dogan/img/R.gif "[1-23] 1 Signal")
| Bacteria, Gram-positive |
| Bacteria, Gram-negative |
| Eukaryota |
|
| TMHMM |
No significant hit |
| SOSUI |
No significant hit |
Calculated information (Amino acid sequence)
| size of protein |
134 amino acids |
| molecular mass |
14,464.54 Da |
| pI |
9.33 |
| aa composition |
| Ala | Val | Leu | Ile | Phe | Trp | Pro | Met | Gly | Ser |
|---|
6.7
(9aa) | 8.2
(11aa) | 9
(12aa) | 9
(12aa) | 2.2
(3aa) | 0.7
(1aa) | 2.2
(3aa) | 2.2
(3aa) | 6.7
(9aa) | 11.9
(16aa) |
| Thr | Cys | Asn | Gln | Tyr | Lys | His | Arg | Asp | Glu |
|---|
6.7
(9aa) | 1.5
(2aa) | 6.7
(9aa) | 2.2
(3aa) | 0.7
(1aa) | 6
(8aa) | 3
(4aa) | 5.2
(7aa) | 6.7
(9aa) | 2.2
(3aa) |
|
Sequence
>STMDT12_C00100 hypothetical protein
ATGCGATCTGTGTTAACGATTTCCGTCGGCCTGCTTTTCGGCCTGGCGTTAAGTAGCGTC
GCGCACGCGAACGACCATAAAATACTGGGTGTTATTGCCATGCCCAGAAATGAAACGAAC
GATCTCACGCTGAAAATTCCCGTCTGCCGCATCGTGAAGCGCATTCAACTCACGGCGGAT
CACGGCGACATCGAACTTAGCGGCGCATCCGTCTATTTTAAAACTGCGCGTAGCGCCAGC
CAAAGCCTGAACGTCCCTTCCTCAATCAAAGAGGGCCAGACAACAGGCTGGATCAATATT
AATAGCGATAACGACAACAAACGCTGCGTATCAAAGATTACCTTCTCAGGCCATACGGTA
AATTCTTCCGATATGGCGAGACTTAAAGTCATTGGCGACGATTAA
>STMDT12_C00100 hypothetical protein
MRSVLTISVGLLFGLALSSVAHANDHKILGVIAMPRNETNDLTLKIPVCRIVKRIQLTAD
HGDIELSGASVYFKTARSASQSLNVPSSIKEGQTTGWININSDNDNKRCVSKITFSGHTV
NSSDMARLKVIGDD
![[1-134] 1.2e-86 PF10807](/dogan/img/H.gif "[1-134] 1.2e-86 PF10807"){kind=small}
![[17-134] 1e-64 PD082838](/dogan/img/D.gif "[17-134] 1e-64 PD082838"){kind=small}