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CDS Information : STMDT12_C05970

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close this sectionGenomic map

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Salmonella enterica serovar Typhimurium T000240 Chromosome

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Overview 
Genome

close this sectionLocation

Organism Salmonella enterica serovar Typhimurium T000240
Replicon Chromosome
Start / Stop / Direction 635,166 / 634,099 / -
Location complement(634099..635166)
Type CDS
Length 1,068 bp (355 aa)

close this sectionAnnotation

Product phosphoribosylaminoimidazole carboxylase ATPase subunit
Gene name
Functional category Metabolism
- [F] Nucleotide transport and metabolism
EC number 4.1.1.21
Note COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)
KEGG pathway
Sequence feature
References Family/Domain:CDD-135713

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=0Q8ZR71_SALTYPhosphoribosylaminoimidazole carboxylase = AIR carboxylase, CO(2)-fixing subunitAlignment
2E=0D0ZP28_SALT1Phosphoribosylaminoimidazole carboxylase ATPase subunitAlignment
3E=0B5R6W6_SALG2Phosphoribosylaminoimidazole carboxylase ATPase subunitAlignment
4E=0B5QUU6_SALEPPhosphoribosylaminoimidazole carboxylase ATPase subunitAlignment
5E=0B5FLP3_SALDCPhosphoribosylaminoimidazole carboxylase, ATPase subunitAlignment
HAMAP No significant hit
InterPro
Database:interpro:26.0
IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type (Domain)
 [88-253]  2.2e-53 PF02222
PF02222   ATP-grasp
IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit (Domain)
 [3-331]  2.9e-178 TIGR01161
TIGR01161   purK: phosphoribosylaminoimidazole carboxyla
IPR011054 Rudiment single hybrid motif (Domain)
 [277-355]  8.4e-21 SSF51246
SSF51246   Rudiment single hybrid motif
IPR011761 ATP-grasp fold (Domain)
 [84-267]  30.23 PS50975
PS50975   ATP_GRASP
IPR013816 ATP-grasp fold, subdomain 2 (Domain)
 [133-355]  1.2e-72 G3DSA:3.30.470.20
G3DSA:3.30.470.20   no description
IPR013817 Pre-ATP-grasp fold (Domain)
 [1-70]  9.9e-27 G3DSA:3.40.50.20
G3DSA:3.40.50.20   no description
IPR016185 PreATP-grasp-like fold (Domain)
 [1-78]  4.2e-18 SSF52440
SSF52440   PreATP-grasp domain
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 355 amino acids
molecular mass 39,141.80 Da
pI 6.13
aa composition
AlaValLeuIlePheTrpProMetGlySer
9
(32aa)
6.5
(23aa)
12.4
(44aa)
5.9
(21aa)
2.5
(9aa)
2.5
(9aa)
5.9
(21aa)
2
(7aa)
8.5
(30aa)
5.6
(20aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
5.1
(18aa)
1.1
(4aa)
3.4
(12aa)
5.4
(19aa)
2
(7aa)
2.5
(9aa)
3.1
(11aa)
5.9
(21aa)
4.5
(16aa)
6.2
(22aa)

open this sectionSequence