CDS Information : STMDT12_C06700
open/close allGenomic map
| Information storage and processing |
| [J] Translation, ribosomal structure and biogenesis |
| [A] RNA processing and modification |
| [K] Transcription |
| [L] Replication, recombination and repair |
| Cellular processes and signaling |
| [D] Cell cycle control, cell division, chromosome partitioning |
| [V] Defense mechanisms |
| [T] Signal transduction mechanisms |
| [M] Cell wall/membrane/envelope biogenesis |
| [N] Cell motility |
| [U] Intracellular trafficking, secretion, and vesicular transport |
| [O] Posttranslational modification, protein turnover, chaperones |
| Metabolism |
| [C] Energy production and conversion |
| [G] Carbohydrate transport and metabolism |
| [E] Amino acid transport and metabolism |
| [F] Nucleotide transport and metabolism |
| [H] Coenzyme transport and metabolism |
| [I] Lipid transport and metabolism |
| [P] Inorganic ion transport and metabolism |
| [Q] Secondary metabolites biosynthesis, transport and catabolism |
| Poorly characterized |
| [R] General function prediction only |
| [S] Function unknown |
| Unannotated |
Location
| Organism |
Salmonella enterica serovar Typhimurium T000240 |
| Replicon |
Chromosome |
| Start / Stop / Direction |
708,502 / 709,065 / + |
| Location |
708502..709065 |
| Type |
CDS |
| Length |
564 bp (187 aa) |
Annotation
| Product |
alkyl hydroperoxide reductase subunit C |
| Gene name |
|
| Functional category |
Cellular processes and signaling
- [O] Posttranslational modification, protein turnover, chaperones |
| EC number |
1.11.1.15 |
| Note |
COG0450 Peroxiredoxin |
| KEGG pathway |
|
| Sequence feature |
|
| References |
Family/Domain:CDD-137861 |
Computational search results
BLASTP
Database:UniProtKB:2010_04
|
|
| HAMAP |
No significant hit |
InterPro
Database:interpro:26.0
|
|
| SignalP |
No significant hit |
| TMHMM |
No significant hit |
| SOSUI |
No significant hit |
Calculated information (Amino acid sequence)
| size of protein |
187 amino acids |
| molecular mass |
20,747.42 Da |
| pI |
4.8 |
| aa composition |
| Ala | Val | Leu | Ile | Phe | Trp | Pro | Met | Gly | Ser |
|---|
10.2
(19aa) | 7
(13aa) | 5.9
(11aa) | 6.4
(12aa) | 5.9
(11aa) | 1.6
(3aa) | 4.3
(8aa) | 1.6
(3aa) | 7
(13aa) | 4.8
(9aa) |
| Thr | Cys | Asn | Gln | Tyr | Lys | His | Arg | Asp | Glu |
|---|
7.5
(14aa) | 1.1
(2aa) | 2.7
(5aa) | 2.7
(5aa) | 2.7
(5aa) | 7.5
(14aa) | 2.7
(5aa) | 3.2
(6aa) | 7.5
(14aa) | 8
(15aa) |
|
Sequence
>STMDT12_C06700 alkyl hydroperoxide reductase subunit C
ATGTCCTTAATTAACACCAAAATCAAACCTTTCAAAAACCAGGCGTTCAAAAACGGTGAA
TTCATTGAAGTCACCGAGAAAGATACCGAAGGCCGCTGGAGCGTCTTCTTCTTCTACCCG
GCCGATTTTACCTTTGTTTGCCCGACTGAACTGGGTGACGTTGCCGACCATTACGAAGAA
CTGCAGAAGCTGGGCGTAGACGTTTATTCCGTCTCAACCGATACTCACTTCACGCACAAA
GCATGGCACAGCAGCTCTGAAACTATCGCAAAAATCAAATATGCGATGATCGGCGACCCG
ACTGGCGCCCTGACCCGTAACTTCGACAACATGCGTGAAGATGAAGGTCTGGCAGACCGT
GCGACCTTTGTTGTTGACCCGCAGGGTATCATCCAGGCGATCGAAGTTACCGCTGAAGGT
ATCGGCCGTGACGCGTCTGACCTGCTGCGTAAAATTAAAGCAGCACAGTACGTTGCCGCT
CACCCAGGCGAAGTATGCCCGGCGAAATGGAAAGAAGGCGAAGCGACTCTGGCTCCATCC
TTAGACCTGGTCGGTAAAATCTAA
>STMDT12_C06700 alkyl hydroperoxide reductase subunit C
MSLINTKIKPFKNQAFKNGEFIEVTEKDTEGRWSVFFFYPADFTFVCPTELGDVADHYEE
LQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADR
ATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVCPAKWKEGEATLAPS
LDLVGKI
![[7-133] 5.4e-33 PF00578](/dogan/img/H.gif "[7-133] 5.4e-33 PF00578"){kind=small}
![[2-187] 3.3e-62 G3DSA:3.40.30.10](/dogan/img/X2.gif "[2-187] 3.3e-62 G3DSA:3.40.30.10"){kind=small}
![[2-187] 4.4e-57 SSF52833](/dogan/img/B.gif "[2-187] 4.4e-57 SSF52833"){kind=small}
![[1-187] 5.3e-120 TIGR03137](/dogan/img/T.gif "[1-187] 5.3e-120 TIGR03137"){kind=small}
![[2-157] 15.262 PS51352](/dogan/img/M.gif "[2-157] 15.262 PS51352"){kind=small}