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CDS Information : STMDT12_C14450

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Salmonella enterica serovar Typhimurium T000240 Chromosome

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Genome

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Organism Salmonella enterica serovar Typhimurium T000240
Replicon Chromosome
Start / Stop / Direction 1,507,681 / 1,507,100 / -
Location complement(1507100..1507681)
Type CDS
Length 582 bp (193 aa)

close this sectionAnnotation

Product superoxide dismutase
Gene name
Functional category Metabolism
- [P] Inorganic ion transport and metabolism
EC number
Note COG0605 Superoxide dismutase
KEGG pathway
Sequence feature
References Family/Domain:CDD-137972

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=1e-109B5RAM8_SALG2Superoxide dismutaseAlignment
2E=1e-109B5QV28_SALEPSuperoxide dismutaseAlignment
3E=1e-109B4THA8_SALHSSuperoxide dismutaseAlignment
4E=1e-109A9N0Y0_SALPBSuperoxide dismutaseAlignment
5E=1e-109B5Q183_SALHASuperoxide dismutaseAlignment
HAMAP No significant hit
InterPro
Database:interpro:26.0
IPR001189 Manganese and iron superoxide dismutase (Family)
 [1-83]  1.3e-38 SSF46609
SSF46609   Fe,Mn superoxide dismutase (SOD), N-terminal domain
 [84-193]  1e-43 SSF54719
SSF54719   Fe,Mn superoxide dismutase (SOD), C-terminal domain
 [6-17]  2.2e-22 PR01703 [27-40]  2.2e-22 PR01703 [65-78]  2.2e-22 PR01703 [118-126]  2.2e-22 PR01703 [155-167]  2.2e-22 PR01703
PR01703   MNSODISMTASE
 [2-82]  6e-35 PF00081
PF00081   Sod_Fe_N
 [1-193]  3.1e-125 PIRSF000349
PIRSF000349   Superoxide dismutase, Mn/Fe specific
 [87-190]  1.8e-45 PF02777
PF02777   Sod_Fe_C
 [157-164]  PS00088
PS00088   SOD_MN
IPR019831 Manganese/iron superoxide dismutase, N-terminal (Domain)
 [2-82]  6e-35 PF00081
PF00081   Sod_Fe_N
 [1-83]  1.3e-38 SSF46609
SSF46609   Fe,Mn superoxide dismutase (SOD), N-terminal domain
IPR019832 Manganese/iron superoxide dismutase, C-terminal (Domain)
 [87-190]  1.8e-45 PF02777
PF02777   Sod_Fe_C
 [84-193]  1e-43 SSF54719
SSF54719   Fe,Mn superoxide dismutase (SOD), C-terminal domain
IPR019833 Manganese/iron superoxide dismutase, binding site (Binding_site)
 [157-164]  PS00088
PS00088   SOD_MN
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 193 amino acids
molecular mass 21,307.86 Da
pI 5.85
aa composition
AlaValLeuIlePheTrpProMetGlySer
14.5
(28aa)
4.7
(9aa)
8.8
(17aa)
4.1
(8aa)
5.7
(11aa)
3.6
(7aa)
4.1
(8aa)
0.5
(1aa)
6.7
(13aa)
5.2
(10aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
7.8
(15aa)
0.5
(1aa)
7.3
(14aa)
1.6
(3aa)
4.7
(9aa)
5.2
(10aa)
3.6
(7aa)
1.6
(3aa)
3.6
(7aa)
6.2
(12aa)

open this sectionSequence