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CDS Information : STMDT12_C18230

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close this sectionGenomic map

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Salmonella enterica serovar Typhimurium T000240 Chromosome

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Overview 
Genome

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Organism Salmonella enterica serovar Typhimurium T000240
Replicon Chromosome
Start / Stop / Direction 1,900,017 / 1,898,947 / -
Location complement(1898947..1900017)
Type CDS
Length 1,071 bp (356 aa)

close this sectionAnnotation

Product alanine racemase
Gene name dadX
Functional category Cellular processes and signaling
- [M] Cell wall/membrane/envelope biogenesis
EC number 5.1.1.1
Note COG0787 Alanine racemase
KEGG pathway
Sequence feature
References Family/Domain:CDD-134911

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=0Q5PN11_SALPAAlanine racemaseAlignment
2E=0D0ZJ79_SALT1Alanine racemaseAlignment
3E=0B5BI51_SALPKAlanine racemaseAlignment
4E=0C9X6I1_SALTDAlanine racemaseAlignment
5E=0B5PP83_SALHAAlanine racemaseAlignment
HAMAP No significant hit
InterPro
Database:interpro:26.0
IPR000821 Alanine racemase region (Domain)
 [27-43]  4.7e-76 PR00992 [61-79]  4.7e-76 PR00992 [121-133]  4.7e-76 PR00992 [155-166]  4.7e-76 PR00992 [190-217]  4.7e-76 PR00992 [248-263]  4.7e-76 PR00992 [265-280]  4.7e-76 PR00992 [286-303]  4.7e-76 PR00992 [338-351]  4.7e-76 PR00992
PR00992   ALARACEMASE
 [3-355]  1.7e-193 TIGR00492
TIGR00492   alr: alanine racemase
 [32-42]  PS00395
PS00395   ALANINE_RACEMASE
 [2-356]  33.194 MF_01201
MF_01201   ALR_MF_01201
IPR001608 Alanine racemase, N-terminal (Domain)
 [10-217]  3.1e-56 PF01168
PF01168   Ala_racemase_N
IPR009006 Alanine racemase/group IV decarboxylase, C-terminal (Domain)
 [225-352]  1.7e-53 SSF50621
SSF50621   Alanine racemase C-terminal domain-like
 [225-353]  3.9e-41 G3DSA:2.40.37.10
G3DSA:2.40.37.10   no description
IPR011079 Alanine racemase, C-terminal (Domain)
 [232-354]  1.1e-38 PF00842
PF00842   Ala_racemase_C
IPR020622 Alanine racemase, pyridoxal-phosphate attachment site (Binding_site)
 [32-42]  PS00395
PS00395   ALANINE_RACEMASE
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 356 amino acids
molecular mass 38,804.42 Da
pI 6.95
aa composition
AlaValLeuIlePheTrpProMetGlySer
11.5
(41aa)
7.6
(27aa)
9.3
(33aa)
5.3
(19aa)
1.7
(6aa)
2.5
(9aa)
5.1
(18aa)
3.4
(12aa)
9.6
(34aa)
4.8
(17aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
6.7
(24aa)
1.1
(4aa)
2.8
(10aa)
5.1
(18aa)
3.4
(12aa)
2.2
(8aa)
2.2
(8aa)
6.5
(23aa)
4.2
(15aa)
5.1
(18aa)

open this sectionSequence