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CDS Information : STMDT12_C28450

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Salmonella enterica serovar Typhimurium T000240 Chromosome

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Genome

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Organism Salmonella enterica serovar Typhimurium T000240
Replicon Chromosome
Start / Stop / Direction 2,965,163 / 2,966,446 / +
Location 2965163..2966446
Type CDS
Length 1,284 bp (427 aa)

close this sectionAnnotation

Product 4-aminobutyrate aminotransferase
Gene name
Functional category Metabolism
- [E] Amino acid transport and metabolism
EC number 2.6.1.19
Note COG0160 4-aminobutyrate aminotransferase and related aminotransferases
KEGG pathway
Sequence feature
References Family/Domain:CDD-136622

close this sectionComputational search results

BLASTP
Database:UniProtKB:2010_04
1E=0Q8ZMM1_SALTY4-aminobutyrate aminotransferaseAlignment
2E=0Q57KY2_SALCH4-aminobutyrate aminotransferaseAlignment
3E=0D0ZU15_SALT14-aminobutyrate aminotransferaseAlignment
4E=0C0PWI9_SALPC4-aminobutyrate aminotransferaseAlignment
5E=0B4TEX6_SALHS4-aminobutyrate transaminaseAlignment
HAMAP No significant hit
InterPro
Database:interpro:26.0
IPR004632 Bacterial 4-aminobutyrate aminotransferase (Family)
 [9-423]  1.6e-193 TIGR00700
TIGR00700   GABAtrnsam: 4-aminobutyrate transaminase
IPR005814 Aminotransferase class-III (Family)
 [236-273]  PS00600
PS00600   AA_TRANSFER_CLASS_3
 [27-360]  1e-118 PF00202
PF00202   Aminotran_3
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (Domain)
 [59-318]  3.8e-83 G3DSA:3.40.640.10
G3DSA:3.40.640.10   no description
IPR015424 Pyridoxal phosphate-dependent transferase, major region (Domain)
 [1-423]  1.4e-132 SSF53383
SSF53383   PLP-dependent transferases
SignalP No significant hit
TMHMM No significant hit
SOSUI No significant hit

close this sectionCalculated information (Amino acid sequence)

size of protein 427 amino acids
molecular mass 45,636.40 Da
pI 6.37
aa composition
AlaValLeuIlePheTrpProMetGlySer
14.1
(60aa)
5.4
(23aa)
9.1
(39aa)
7.7
(33aa)
3.3
(14aa)
0.2
(1aa)
4.4
(19aa)
2.8
(12aa)
10.1
(43aa)
3.3
(14aa)
ThrCysAsnGlnTyrLysHisArgAspGlu
5.2
(22aa)
1.9
(8aa)
3.7
(16aa)
3.7
(16aa)
2.8
(12aa)
3.5
(15aa)
2.8
(12aa)
5.4
(23aa)
4.4
(19aa)
6.1
(26aa)

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