CDS Information : STMDT12_C42670
open/close allGenomic map
| Information storage and processing |
| [J] Translation, ribosomal structure and biogenesis |
| [A] RNA processing and modification |
| [K] Transcription |
| [L] Replication, recombination and repair |
| Cellular processes and signaling |
| [D] Cell cycle control, cell division, chromosome partitioning |
| [V] Defense mechanisms |
| [T] Signal transduction mechanisms |
| [M] Cell wall/membrane/envelope biogenesis |
| [N] Cell motility |
| [U] Intracellular trafficking, secretion, and vesicular transport |
| [O] Posttranslational modification, protein turnover, chaperones |
| Metabolism |
| [C] Energy production and conversion |
| [G] Carbohydrate transport and metabolism |
| [E] Amino acid transport and metabolism |
| [F] Nucleotide transport and metabolism |
| [H] Coenzyme transport and metabolism |
| [I] Lipid transport and metabolism |
| [P] Inorganic ion transport and metabolism |
| [Q] Secondary metabolites biosynthesis, transport and catabolism |
| Poorly characterized |
| [R] General function prediction only |
| [S] Function unknown |
| Unannotated |
Location
| Organism |
Salmonella enterica serovar Typhimurium T000240 |
| Replicon |
Chromosome |
| Start / Stop / Direction |
4,442,993 / 4,440,342 / - |
| Location |
complement(4440342..4442993) |
| Type |
CDS |
| Length |
2,652 bp (883 aa) |
Annotation
| Product |
phosphoenolpyruvate carboxylase |
| Gene name |
|
| Functional category |
Metabolism
- [C] Energy production and conversion |
| EC number |
4.1.1.31 |
| Note |
COG2352 Phosphoenolpyruvate carboxylase |
| KEGG pathway |
|
| Sequence feature |
|
| References |
Family/Domain:CDD-134026 |
Computational search results
BLASTP
Database:UniProtKB:2010_04
|
|
| HAMAP |
No significant hit |
InterPro
Database:interpro:26.0
|
|
| SignalP |
No significant hit |
| TMHMM |
No significant hit |
| SOSUI |
No significant hit |
Calculated information (Amino acid sequence)
| size of protein |
883 amino acids |
| molecular mass |
99,002.60 Da |
| pI |
6.09 |
| aa composition |
| Ala | Val | Leu | Ile | Phe | Trp | Pro | Met | Gly | Ser |
|---|
8.7
(77aa) | 5.8
(51aa) | 13.3
(117aa) | 4.8
(42aa) | 2
(18aa) | 2.2
(19aa) | 5.1
(45aa) | 2.7
(24aa) | 6.3
(56aa) | 6.1
(54aa) |
| Thr | Cys | Asn | Gln | Tyr | Lys | His | Arg | Asp | Glu |
|---|
5.1
(45aa) | 0.9
(8aa) | 4
(35aa) | 4.2
(37aa) | 2.7
(24aa) | 5.1
(45aa) | 1.6
(14aa) | 6.6
(58aa) | 5.1
(45aa) | 7.8
(69aa) |
|
Sequence
>STMDT12_C42670 phosphoenolpyruvate carboxylase
ATGAACGAACAATATTCCGCGTTGCGTAGTAATGTCAGTATGCTCGGCAAGGTGCTGGGA
GAAACCATCAAGGATGCGCTGGGAGAACACATTCTTGATCGCGTAGAAACAATCCGTAAG
CTATCCAAATCTTCACGCGCCGGCAATGAAGCTAATCGCCAGGAGCTGCTCACCACGCTA
CAAAATTTGTCTAATGACGAGCTGCTGCCAGTTGCGCGCGCGTTTAGTCAGTTCCTGAAC
CTGGCCAATACTGCCGAGCAATACCACAGCATTTCGCCAAAAGGCGAAGCCGCCAGCAAC
CCGGAAGTGATTGCCCGCACTCTGCGCAAACTGAAAAACCAACCGGACCTCAACGACGCA
ACCATCAAAAAAGCGGTAGAGTCGCTGTCTCTGGAGTTGGTGCTAACCGCCCATCCGACA
GAAATTACCCGCCGTACGCTTATTCACAAAATGGGTGAAATCAACAACTGTCTAAAACAG
CTTGATAATACCGATATCGCCGACTACGAACGCCACCAGGTAATGCGTCGCCTGCGCCAG
TTGATTGCCCAATCCTGGCATACGGATGAGATCCGCAAGCAGCGTCCAAGCCCGGTGGAT
GAAGCCAAATGGGGCTTCGCCGTGGTTGAGAACAGCCTGTGGCAGGGCGTACCTAACTAT
CTGCGTGAACTGAACGAACAGCTGGAAGAAAATCTCGGCTACAAATTGCCGGTGGATTTT
GTGCCGGTACGTTTTACCTCCTGGATGGGCGGCGACCGTGACGGCAACCCGAACGTGACG
GCGGATATCACCCGCCACGTACTCTTGTTAAGCCGCTGGAAAGCCACCGATCTGTTCCTG
AAAGACATTCATGTTCTGGTATCAGAACTGTCGATGGTCGACGCCACGCCGGAGCTGCTG
GCGTTAGTGGGCGAAGAAGGCGCGTCTGAGCCGTATCGCTACCTGATGAAAAAATTGCGC
GCCCGTCTGATGGCGACCCAGTCCTGGCTGGAAGCGCGTCTGAAAGGCGAGAAGCTGCCC
AAACCGGCTGGCCTGCTGACGCAAAACGAGCAGCTCTGGGAACCTCTGTACGCCTGCTAC
CAGTCGTTACAGGCCTGCGGCATGGGCATTATCGCCAACGGCGAGTTACTCGACACGCTC
CGCCGCGTGAAGTGTTTCGGCGTACCGCTGGTGCGTATTGATATCCGCCAGGAAAGTACC
CGCCATACTGAAGCGCTGGGCGAAATTACCCGCTACCTCGGTATTGGCGACTACGAAAGC
TGGTCGGAAGCCGACAAGCAGGCCTTCCTGATCCGCGAACTGAACTCCAAACGTCCGCTG
CTGCCGCGTAACTGGGAGCCGAGCAACGATACCCGCGAAGTGCTTGAAACCTGCAAGGTT
ATTGCCGAAGCGCCAAAAGGATCGATCGCCGCCTACGTAATTTCAATGGCGAAAACGCCG
TCTGATGTGCTGGCTGTGCATCTGCTGCTGAAAGAGGCAGGTATCGGCTTTGCCATGCCG
GTCGCGCCGCTGTTTGAAACCCTCGATGACCTGAACAATGCCGACGACGTGATGACCCAG
TTGTTGAATATCGACTGGTATCGCGGACTGATTCAGGGTAAGCAGATGGTCATGATCGGC
TACTCCGACTCGGCGAAAGACGCCGGCGTTATGGCCGCGTCATGGGCGCAGTATCAGGCG
CAGGACGCCCTGATCAAAACCTGTGAAAAAGCCGGCATCGAGCTTACCCTCTTCCACGGC
CGCGGCGGATCTATTGGCCGTGGCGGCGCGCCAGCCCACGCGGCGCTGCTTTCGCAACCG
CCAGGCAGTCTGAAAGGCGGTCTGCGCGTGACCGAGCAGGGCGAGATGATCCGCTTCAAA
TACGGCCTGCCGGAAGTCACCGTCAGCAGCCTCTCGCTCTACACCAGCGCAATTCTGGAA
GCAAACCTGCTGCCGCCGCCGGAACCGAAAGACAGCTGGCGTCATATTATGGATGAGCTT
TCCGTCATCTCCTGTGAAACCTACCGCGGCTACGTGCGCGAAAATAAAGACTTTGTACCG
TACTTCCGCTCCGCGACGCCGGAGCAAGAGTTGGGCAAATTGCCGCTCGGCTCACGTCCG
GCGAAACGTCGTCCAACTGGCGGCGTCGAATCGCTGCGCGCGATTCCGTGGATCTTCGCC
TGGACGCAAAACCGCCTGATGCTGCCAGCCTGGCTGGGCGCGGGTACTGCGCTGCAAAAA
GTGGTGGAAGACGGTAAACAAAGCGAACTGGAAGCCATGTGCCGCGACTGGCCGTTCTTC
TCCACGCGTCTTGGGATGCTGGAAATGGTGTTCTCGAAAGCCGACCTGTGGCTGGCCGAC
TATTACGATCAGCGCCTGGTGGCGAAAACGCTTTGGCCGCTGGGCAAAGAGCTACGAGAC
CTACTGGAAGAAGACATTAAAGTGGTGCTGGCGATTGCCAACGATTCGCACCTGATGGCC
GACTTACCGTGGATTGCGGAGTCCATTCAGTTAAGAAACGTTTATACCGATCCATTAAAC
GTGTTGCAGGCCGAATTGCTGTATCGTTCCCGTCTGACTGAAGAGCAGGGCAAATCGCCC
GATCCTCGCGTCGAACAGGCGTTGATGGTCACGATTGCGGGCGTCGCTGCCGGTATGCGC
AACACCGGCTAA
>STMDT12_C42670 phosphoenolpyruvate carboxylase
MNEQYSALRSNVSMLGKVLGETIKDALGEHILDRVETIRKLSKSSRAGNEANRQELLTTL
QNLSNDELLPVARAFSQFLNLANTAEQYHSISPKGEAASNPEVIARTLRKLKNQPDLNDA
TIKKAVESLSLELVLTAHPTEITRRTLIHKMGEINNCLKQLDNTDIADYERHQVMRRLRQ
LIAQSWHTDEIRKQRPSPVDEAKWGFAVVENSLWQGVPNYLRELNEQLEENLGYKLPVDF
VPVRFTSWMGGDRDGNPNVTADITRHVLLLSRWKATDLFLKDIHVLVSELSMVDATPELL
ALVGEEGASEPYRYLMKKLRARLMATQSWLEARLKGEKLPKPAGLLTQNEQLWEPLYACY
QSLQACGMGIIANGELLDTLRRVKCFGVPLVRIDIRQESTRHTEALGEITRYLGIGDYES
WSEADKQAFLIRELNSKRPLLPRNWEPSNDTREVLETCKVIAEAPKGSIAAYVISMAKTP
SDVLAVHLLLKEAGIGFAMPVAPLFETLDDLNNADDVMTQLLNIDWYRGLIQGKQMVMIG
YSDSAKDAGVMAASWAQYQAQDALIKTCEKAGIELTLFHGRGGSIGRGGAPAHAALLSQP
PGSLKGGLRVTEQGEMIRFKYGLPEVTVSSLSLYTSAILEANLLPPPEPKDSWRHIMDEL
SVISCETYRGYVRENKDFVPYFRSATPEQELGKLPLGSRPAKRRPTGGVESLRAIPWIFA
WTQNRLMLPAWLGAGTALQKVVEDGKQSELEAMCRDWPFFSTRLGMLEMVFSKADLWLAD
YYDQRLVAKTLWPLGKELRDLLEEDIKVVLAIANDSHLMADLPWIAESIQLRNVYTDPLN
VLQAELLYRSRLTEEQGKSPDPRVEQALMVTIAGVAAGMRNTG
![[133-146] 1.7e-68 PR00150](/dogan/img/F.gif "[133-146] 1.7e-68 PR00150"){kind=small}
![[537-549] PS00393](/dogan/img/P.gif "[537-549] PS00393"){kind=small}
![[423-879] 1.9e-83 PF00311](/dogan/img/H.gif "[423-879] 1.9e-83 PF00311"){kind=small}
![[4-883] SSF51621](/dogan/img/B.gif "[4-883] SSF51621"){kind=small}
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