DOGAN: CDS Information : STMDT12

Display

Salmonella enterica serovar Typhimurium T000240 Chromosome

Overview
Genome

Center position		change
ID		change
Gene name		change

Genome	Display	Sync
Chromosome

Organism	Salmonella enterica serovar Typhimurium T000240
Replicon	Chromosome
Start / Stop / Direction	4,464,707 / 4,463,781 / -
Location	complement(4463781..4464707)
Type	CDS
Length	927 bp (308 aa)

Product	pantothenate kinase
Gene name
Functional category	Metabolism - [H] Coenzyme transport and metabolism
EC number	2.7.1.33
Note	COG1072 Panthothenate kinase
KEGG pathway
Sequence feature
References	Family/Domain:CDD-135386

BLASTP
Database:UniProtKB:2010_04

show BLAST table

1	E=0	D0ZQU4_SALT1	Pantothenate kinase	Alignment
2	E=0	C9XBI7_SALTD	Pantothenate kinase	Alignment
3	E=0	B5Q4V9_SALVI	Pantothenate kinase	Alignment
4	E=0	B5PNJ2_SALET	Pantothenate kinase	Alignment
5	E=0	B5PA19_SALET	Pantothenate kinase	Alignment

HAMAP

No significant hit

InterPro
Database:interpro:26.0

IPR004566 Bacterial pantothenate kinase (Family)
	MF_00215 COAA_MF_00215
	TIGR00554 panK_bact: pantothenate kinase
	PIRSF000545 Pantothenate kinase, bacterial type
IPR006083 Phosphoribulokinase/uridine kinase (Domain)
	PF00485 PRK
IPR006083 Phosphoribulokinase/uridine kinase (Family)
	PF00485 PRK
IPR006083 Phosphoribulokinase/uridine kinase (Region)
	PF00485 PRK

SignalP

No significant hit

TMHMM

No significant hit

SOSUI

No significant hit

size of protein

308 amino acids

molecular mass

35,318.42 Da

pI

6.61

aa composition

Ala	Val	Leu	Ile	Phe	Trp	Pro	Met	Gly	Ser
6.2 (19aa)	7.5 (23aa)	12 (37aa)	5.8 (18aa)	4.2 (13aa)	1.6 (5aa)	5.2 (16aa)	1.9 (6aa)	4.2 (13aa)	7.1 (22aa)
Thr	Cys	Asn	Gln	Tyr	Lys	His	Arg	Asp	Glu
5.2 (16aa)	0 (0aa)	4.5 (14aa)	4.2 (13aa)	3.9 (12aa)	5.2 (16aa)	2.9 (9aa)	5.8 (18aa)	5.5 (17aa)	6.8 (21aa)

>STMDT12_C42810 pantothenate kinase
ATGACGCCTTACCTACAGTTTGATCGCAGCCAGTGGGCTGCGCTTCGCGATTCTGTGCCG
ATGACCCTGACCGAGGATGAGATCGCGCAGTTAAAAGGCATTAATGAAGATTTATCGCTG
GAAGAAGTTGCAGAAATATATTTACCTCTCTCCCGTTTGCTAAATTTCTATATCAGTTCA
AATCTGCGTCGTCAGGCTGTCCTGGAACAGTTTCTGGGCACTAACGGCCAGCGAATCCCT
TACATCATCAGTATCGCGGGCAGCGTCGCAGTGGGTAAAAGCACGACAGCACGCGTTCTG
CAAGCGTTGCTGAGTCGCTGGCCGGAACACCGCCGTGTTGAATTGATTACCACAGACGGC
TTCCTCCACCCAAACCAGGTGTTGAAAGAACGCGGGTTAATGAAGAAAAAGGGGTTCCCC
GAATCGTATGATATGCACCGACTGGTGAAATTCGTTTCTGACCTCAAGTCGGGCGTACCG
AACGTGACGGCGCCAGTCTATTCTCATTTGATTTACGATGTTATTCCTGAAGGGGATAAA
ACCGTCGCTCAGCCTGATATATTGATTCTTGAAGGTTTGAATGTTTTACAAAGCGGTATG
GATTATCCTCACGATCCGCATCATGTATTTGTCTCTGATTTCGTTGATTTCTCTATTTAC
GTGGATGCGCCAGAAGAACTTCTTCAGACGTGGTATATCAATCGCTTCCTGAAATTCCGC
GAAGGGGCGTTTACCGATCCTGACTCTTATTTCCACAATTATGCGAAATTATCTAAAGAA
GAAGCTGTTAATACAGCAACTTCGCTTTGGAAAGAAATTAACTGGTTGAATTTAAAACAA
AATATCTTACCTACACGAGAACGTGCCAGCCTTATTATGACCAAGAGCGCTAACCATGCG
GTGGAACAGGTAAGATTGCGGAAATAA


>STMDT12_C42810 pantothenate kinase
MTPYLQFDRSQWAALRDSVPMTLTEDEIAQLKGINEDLSLEEVAEIYLPLSRLLNFYISS
NLRRQAVLEQFLGTNGQRIPYIISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTDG
FLHPNQVLKERGLMKKKGFPESYDMHRLVKFVSDLKSGVPNVTAPVYSHLIYDVIPEGDK
TVAQPDILILEGLNVLQSGMDYPHDPHHVFVSDFVDFSIYVDAPEELLQTWYINRFLKFR
EGAFTDPDSYFHNYAKLSKEEAVNTATSLWKEINWLNLKQNILPTRERASLIMTKSANHA
VEQVRLRK

CDS Information : STMDT12_C42810

Genomic map

Salmonella enterica serovar Typhimurium T000240 Chromosome

Location

Annotation

Computational search results

Calculated information (Amino acid sequence)

Sequence