CDS Information : STMDT12_C46530
open/close allGenomic map
| Information storage and processing |
| [J] Translation, ribosomal structure and biogenesis |
| [A] RNA processing and modification |
| [K] Transcription |
| [L] Replication, recombination and repair |
| Cellular processes and signaling |
| [D] Cell cycle control, cell division, chromosome partitioning |
| [V] Defense mechanisms |
| [T] Signal transduction mechanisms |
| [M] Cell wall/membrane/envelope biogenesis |
| [N] Cell motility |
| [U] Intracellular trafficking, secretion, and vesicular transport |
| [O] Posttranslational modification, protein turnover, chaperones |
| Metabolism |
| [C] Energy production and conversion |
| [G] Carbohydrate transport and metabolism |
| [E] Amino acid transport and metabolism |
| [F] Nucleotide transport and metabolism |
| [H] Coenzyme transport and metabolism |
| [I] Lipid transport and metabolism |
| [P] Inorganic ion transport and metabolism |
| [Q] Secondary metabolites biosynthesis, transport and catabolism |
| Poorly characterized |
| [R] General function prediction only |
| [S] Function unknown |
| Unannotated |
Location
| Organism |
Salmonella enterica serovar Typhimurium T000240 |
| Replicon |
Chromosome |
| Start / Stop / Direction |
4,877,983 / 4,876,394 / - |
| Location |
complement(4876394..4877983) |
| Type |
CDS |
| Length |
1,590 bp (529 aa) |
Annotation
| Product |
DNA methylase M |
| Gene name |
|
| Functional category |
Cellular processes and signaling
- [V] Defense mechanisms |
| EC number |
|
| Note |
COG0286 Type I restriction-modification system methyltransferase subunit |
| KEGG pathway |
|
| Sequence feature |
|
| References |
Family/Domain:CDD-111293 |
Computational search results
BLASTP
Database:UniProtKB:2010_04
|
|
| HAMAP |
No significant hit |
InterPro
Database:interpro:26.0
|
| IPR002052 DNA methylase, N-6 adenine-specific, conserved site (Conserved_site) |  ![[263-269] PS00092](/dogan/img/P.gif "[263-269] PS00092")
| PS00092 N6_MTASE | | IPR002052 N-6 Adenine-specific DNA methylase (Domain) |
| PS00092 N6_MTASE | | IPR002296 N6 adenine-specific DNA methyltransferase, N12 class (Domain) | ![[147-163] 3.8e-20 PR00507](/dogan/img/F.gif "[147-163] 3.8e-20 PR00507")
| PR00507 N12N6MTFRASE | | IPR002296 N6 adenine-specific DNA methyltransferase, N12 class (Family) |
| PR00507 N12N6MTFRASE | | IPR003356 N-6 DNA methylase (Domain) | ![[123-449] 1.8e-96 PF02384](/dogan/img/H.gif "[123-449] 1.8e-96 PF02384")
| PF02384 N6_Mtase | | IPR022749 N6 adenine-specific DNA methyltransferase, N12 class, N-terminal (Domain) |
| PF12161 HsdM_N |
|
| SignalP |
No significant hit |
| TMHMM |
No significant hit |
| SOSUI |
No significant hit |
Calculated information (Amino acid sequence)
| size of protein |
529 amino acids |
| molecular mass |
59,311.37 Da |
| pI |
4.79 |
| aa composition |
| Ala | Val | Leu | Ile | Phe | Trp | Pro | Met | Gly | Ser |
|---|
6.8
(36aa) | 5.3
(28aa) | 10.8
(57aa) | 3.8
(20aa) | 4
(21aa) | 1.5
(8aa) | 4.3
(23aa) | 2.1
(11aa) | 7.9
(42aa) | 4.7
(25aa) |
| Thr | Cys | Asn | Gln | Tyr | Lys | His | Arg | Asp | Glu |
|---|
6
(32aa) | 1.1
(6aa) | 5.5
(29aa) | 5.1
(27aa) | 2.5
(13aa) | 5.3
(28aa) | 3
(16aa) | 4.9
(26aa) | 8.5
(45aa) | 6.8
(36aa) |
|
Sequence
>STMDT12_C46530 DNA methylase M
ATGAACAATAACGATCTGGTCGCCAAGCTGTGGAAACTGTGCGACAACCTGCGTGACGGC
GGCGTCTCCTATCAAAACTACGTCAATGAACTCGCCTCGCTGCTGTTTTTGAAAATGTGC
AAAGAGACCGGCCAGGAAGCGGACTACCTGCCGGAAGGCTACCGCTGGGATGACCTGAAA
TCGCGTATTGGCCAGGATCAGATGCAGTTCTACCGCAACCTGCTGGTTCAGTTAGGCTCA
GATGAGAAAAAGCTGGTGCAGGCGGTATTCCATAATGTCAGCACCACCATTGAGCAACCC
AAACAGCTGACTGAGCTGGTCAGCTATATGGATGCGCTGGACTGGTACAATGGCAACCAC
GGGAAATCCCGCGACGACTTCGGCGATATGTACGAAGGGCTGCTGCAGAAGAACGCCAAC
GAAACCAAATCTGGCGCGGGCCAGTACTTCACCCCACGCCCGCTGATCAAAACCATTATC
CATCTGCTGAAACCGCAGCCGCGTGAAGTGGTGCAGGACCCGGCGGCGGGTACGGCGGGC
TTTTTGATTGAAGCTGACCGTTACGTGAAATCACAGACTAACGATCTGGATGACCTTGAT
GGCGACACTCAGGATTTCCAGATCCACCGCGCGTTTATCGGCCTCGAACTGGTGCCCGGC
ACCCGCCGTCTGGCGCTGATGAACTGTCTGCTGCACGATATTGAAGGCAACCTCGACCAC
GGCGGCGCTATCCGTCTGGGCAACACGCTGGGCAGCGACGGTGAAAACCTGCCGAAGGCA
CATATCGTCGCCACCAACCCGCCGTTTGGCAGCGCCGCGGGCACCAACATTACCCGTACC
TTCGTGCACCCGACCAGCAACAAACAGCTGTGCTTTATGCAGCATATTATTGAAACCCTG
CACCCCGGCGGCCGCGCGGCGGTGGTGGTGCCGGATAACGTGCTGTTTGAAGGCGGTAAG
GGCACCGATATTCGTCGCGACCTGATGGACAAATGCCATCTGCACACCATCCTGCGTCTG
CCGACCGGTATCTTTTACGCCCAGGGCGTCAAAACCAACGTGCTGTTCTTTACCAAAGGC
ACGGTCACCAATCCGCATCAGGATAAAAACTGCACCGATGACGTGTGGGTGTATGACCTG
CGGACCAATATGCCGAGCTTCGGCAAGCGCACGCCGTTTACCGAGCAGCATCTGCAGCCG
TTTGAAACTGTCTACGGCGAAGATCCACACGGCTTAAGTCCGCGTGAAGAAGGGGAGTGG
AGCTTTAACGCCGAAGAGAGCGAAGTCGCCGACAGCGAAGAGAACAAGAACACTGACCAG
CACCAGGCCACCAGCCGCTGGCGCAAGTTCAGCCGCGAGTGGATCCGCAGCGCAAAATCC
GATTCGCTGGATATCTCCTGGCTGAAGGATAAAGACAGCATCGACGCCGACAGTCTGCCG
GAGCCGGACGTGCTGGCGGCAGAAGCGATGGGCGAGCTGGTACAGGCGCTGGGCGAACTG
GATGCGCTGATGCGCGAGCTGGGCGCGGGCGATGAAGCGGATGCTCAGCGTCAGTTGCTG
AATGAAGCGTTTGGCGAGGTGAAGGCATGA
>STMDT12_C46530 DNA methylase M
MNNNDLVAKLWKLCDNLRDGGVSYQNYVNELASLLFLKMCKETGQEADYLPEGYRWDDLK
SRIGQDQMQFYRNLLVQLGSDEKKLVQAVFHNVSTTIEQPKQLTELVSYMDALDWYNGNH
GKSRDDFGDMYEGLLQKNANETKSGAGQYFTPRPLIKTIIHLLKPQPREVVQDPAAGTAG
FLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDH
GGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETL
HPGGRAAVVVPDNVLFEGGKGTDIRRDLMDKCHLHTILRLPTGIFYAQGVKTNVLFFTKG
TVTNPHQDKNCTDDVWVYDLRTNMPSFGKRTPFTEQHLQPFETVYGEDPHGLSPREEGEW
SFNAEESEVADSEENKNTDQHQATSRWRKFSREWIRSAKSDSLDISWLKDKDSIDADSLP
EPDVLAAEAMGELVQALGELDALMRELGAGDEADAQRQLLNEAFGEVKA
