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open this sectionAbout DOGAN

close this sectionWhat's new

close this date 2013-03-12 ..... 1
2013-03-12 Release of proteome analysis result of Rhodococcus opacus B4
imageWe opened proteome results of Rhodococcus opacus B4 produced by using MALDI-TOFMS, LC-MS/MS and Protein Sequencer.
close this date 2012-05-15 ..... 4
2012-05-15 Release of proteome analysis result of Anaerolinea thermophila UNI-1T
imageWe have analyzed the proteome of Anaerolinea thermophila UNI-1T by using the following method; 2D-PAGE followed by N-terminal amino acid sequencing.
Changed ORFs
IDold locationnew locationstatus
ANT_08520937498..938943937504..938943CHANGE
ANT_180902038292..20392872038361..2039287CHANGE
ANT_259702862568..28630682862592..2863068CHANGE
ANT_27620complement(3050030..3050536)complement(3050030..3050530)CHANGE
ANT_31020complement(3446466..3447107)complement(3446466..3447068)CHANGE

2012-05-15 Release of proteome analysis result of Gemmatimonas aurantiaca T-27T
imageWe have analyzed the proteome of Gemmatimonas aurantiaca T-27T by using the following method; 2D-PAGE followed by N-terminal amino acid sequencing.
2012-05-15 Release of proteome analysis result of Arthrospira platensis NIES-39
imageWe have analyzed the proteome of Arthrospira platensis NIES-39 by using the following method; 2D-PAGE followed by N-terminal amino acid sequencing.
Changed ORFs
IDold locationnew locationstatus
NIES39_C00580complement(1077725..1078279)complement(1077725..1078252)CHANGE
NIES39_K02910complement(4160329..4161318)complement(4160329..4161327)CHANGE
NIES39_Q00760complement(6353241..6354005)complement(6353241..6353936)CHANGE

2012-05-15 Update of proteome analysis result of Sulfolobus tokodaii 7T
imageWe have updated gene assignment of 2 CDS based on N-terminal amino acid sequencing result.

Changed ORFs
IDold locationnew locationstatus
STK_09620938120..937341938195..937341CHANGE
STK_127501274212..12736851274272..1273685CHANGE

close this sectionMicroorganism in DOGAN


Genome Comparative
Genome
Proteome Sequence Annotation Proteome
status / availability status / availability status / availability
Aspergillus oryzae RIB40
Eukaryota      NBRC 100959
ID ListAOAOcheckedcheckedchecked
Saccharomyces cerevisiae K7
Eukaryota      NBRC 101557
ID ListSC1checkedchecked
Aeropyrum pernix K1T
Archaea      NBRC 100138T
ID ListAPEAPEcheckedcheckedchecked
Sulfolobus tokodaii strain 7T
Archaea      NBRC 100140T
ID ListSTSTSTcheckedcheckedchecked
Methanocella paludicola SANAET
Archaea      NBRC 101707T
ID ListMI1checkedchecked
Pyrococcus horikoshii OT3T
Archaea      NBRC 100139T
ID ListOT3OT3checkedchecked
Kitasatospora setae NBRC 14216T
Bacteria      
ID ListKS1checkedchecked
update
Rhodococcus opacus B4
Bacteria      
ID ListOPACUSOPACUScheckedcheckedchecked
Rhodococcus erythropolis PR4
Bacteria      NBRC 100887
ID ListPR4checkedchecked
Kocuria rhizophila DC2201
Bacteria      NBRC 103217
ID ListMICROcheckedchecked
Microlunatus phosphovorus NM-1T
Bacteria      NBRC 101784T
ID ListMP1checkedchecked
Corynebacterium efficiens YS-314T
Bacteria      NBRC 100395T
ID ListCEcheckedchecked
Streptomyces avermitilis MA-4680T
Bacteria      NBRC 14893T
ID ListSAVcheckedchecked
Caldisericum exile AZM16c01T
Bacteria      NBRC 104410T
ID ListBC1checkedchecked
Anaerolinea thermophila UNI-1T
Bacteria      NBRC 100420T
ID ListAT1AT1checkedcheckedchecked
Arthrospira platensis NIES-39
Bacteria      
ID ListSP2SP2checkedcheckedchecked
Deferribacter desulfuricans SSM1T
Bacteria      NBRC 101012T
ID ListDD1checkedchecked
Staphylococcus haemolyticus JCSC1435
Bacteria      
ID ListSHASHAcheckedchecked
Staphylococcus aureus MW2
Bacteria      
ID ListMW2MW2checkedchecked
Staphylococcus aureus N315
Bacteria      
ID ListN315N315checkedchecked
Brevibacillus brevis NBRC 100599
Bacteria      
ID ListBBRcheckedchecked
Oscillibacter valericigenes Sjm18-20T
Bacteria      NBRC 101213T
ID ListOV1checkedchecked
Gemmatimonas aurantiaca T-27T
Bacteria      NBRC 100505T
ID ListGA1GA1checkedcheckedchecked
Acetobacter pasteurianus IFO 3283-32
Bacteria      NBRC 105190
ID ListAS1checkedchecked
Acidiphilium multivorum AIU301
Bacteria      NBRC 100883
ID ListAM1checkedchecked
Sphingobium japonicum UT26S
Bacteria      NBRC 101211
ID ListSP1_2checkedchecked
Sphingobium sp. SYK-6
Bacteria      NBRC 103272
ID ListSS1checkedchecked
Desulfovibrio magneticus RS-1
Bacteria      NBRC 104933
ID ListMAGcheckedchecked
Salmonella enterica serovar Typhimurium T000240
Bacteria      
ID ListSE1checkedchecked

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