BLAST table : Ansam_00350

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accessionDBtoolalignmentEvalueScoreIdent.linkproductgeneorganismec
1
Q8KUI1_ACTPA
(Q8KUI1)
[query] 1 - 348 (348)
[subject] 1 - 348 (348)
0.0 689   100% RNA polymerase sigma factor asm31 Actinosynnema pretiosum subsp. auranticum
2
C6W8L5_ACTMD
(C6W8L5)
[query] 1 - 348 (348)
[subject] 1 - 349 (349)
0.0 660   97% RNA polymerase sigma factor Amir_3204 Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971)
3
Q73W40_MYCPA
(Q73W40)
[query] 24 - 348 (348)
[subject] 183 - 509 (509)
1e-118 429   65% RNA polymerase sigma factor sigA
MAP_2820
Mycobacterium paratuberculosis
4
Q9S5K3_MYCLE
(Q9S5K3)
[query] 24 - 348 (348)
[subject] 250 - 576 (576)
1e-118 428   65% RNA polymerase sigma factor rpoT Mycobacterium leprae
5
Q59532_MYCLE
(Q59532)
[query] 24 - 348 (348)
[subject] 248 - 574 (574)
1e-118 427   65% RNA polymerase sigma factor rpoT
ML1022
Mycobacterium leprae
6
B8ZQV8_MYCLB
(B8ZQV8)
[query] 24 - 348 (348)
[subject] 248 - 574 (574)
1e-118 427   65% RNA polymerase sigma factor rpoT
MLBr01022
Mycobacterium leprae (strain Br4923)
7
A0QIN4_MYCA1
(A0QIN4)
[query] 24 - 348 (348)
[subject] 170 - 496 (496)
1e-117 427   65% RNA polymerase sigma factor MAV_3595 Mycobacterium avium (strain 104)
8
F7PAK8_MYCPA
(F7PAK8)
[query] 24 - 348 (348)
[subject] 170 - 496 (496)
1e-117 427   65% RNA polymerase sigma factor RpoD, C-terminal domain/RNA polymerase sigma factor, sigma-70 family MAPs_08600 Mycobacterium avium subsp. paratuberculosis S397
9
D5PJP8_9MYCO
(D5PJP8)
[query] 24 - 348 (348)
[subject] 177 - 503 (503)
1e-117 427   65% RNA polymerase sigma factor sigA
HMPREF0591_6392
Mycobacterium parascrofulaceum ATCC BAA-614
10
A0QW02_MYCS2
(A0QW02)
[query] 24 - 348 (348)
[subject] 140 - 466 (466)
1e-117 426   65% RNA polymerase sigma factor MSMEG_2758 Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
11
Q59552_MYCSM
(Q59552)
[query] 24 - 348 (348)
[subject] 140 - 466 (466)
1e-117 426   65% RNA polymerase sigma factor mysA Mycobacterium smegmatis
12
D6ZER0_SEGRD
(D6ZER0)
[query] 24 - 348 (348)
[subject] 115 - 441 (441)
1e-117 425   66% RNA polymerase sigma factor Srot_0961 Segniliparus rotundus (strain ATCC BAA-972 / CDC 1076 / CIP 108378 / DSM 44985 / JCM 13578)
13
Q60158_MYCBO
(Q60158)
[query] 24 - 348 (348)
[subject] 202 - 528 (528)
1e-117 424   64% RNA polymerase sigma factor rpoV Mycobacterium bovis
14
C6DLK4_MYCTK
(C6DLK4)
[query] 24 - 348 (348)
[subject] 202 - 528 (528)
1e-117 424   64% RNA polymerase sigma factor TBMG_01270 Mycobacterium tuberculosis (strain KZN 1435 / MDR)
15
C1AFG2_MYCBT
(C1AFG2)
[query] 24 - 348 (348)
[subject] 202 - 528 (528)
1e-117 424   64% RNA polymerase sigma factor sigA
JTY_2710
Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019)
16
A5WQV6_MYCTF
(A5WQV6)
[query] 24 - 348 (348)
[subject] 202 - 528 (528)
1e-117 424   64% RNA polymerase sigma factor TBFG_12718 Mycobacterium tuberculosis (strain F11)
17
A5U655_MYCTA
(A5U655)
[query] 24 - 348 (348)
[subject] 202 - 528 (528)
1e-117 424   64% RNA polymerase sigma factor sigA
MRA_2731
Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra)
18
A1KM41_MYCBP
(A1KM41)
[query] 24 - 348 (348)
[subject] 202 - 528 (528)
1e-117 424   64% RNA polymerase sigma factor sigA
BCG_2716
Mycobacterium bovis (strain BCG / Pasteur 1173P2)
19
F7WWV0_MYCTU
(F7WWV0)
[query] 24 - 348 (348)
[subject] 202 - 528 (528)
1e-117 424   64% RNA polymerase sigma factor sigA CCDC5180_2454 Mycobacterium tuberculosis CCDC5180
20
F7WHQ3_MYCTU
(F7WHQ3)
[query] 24 - 348 (348)
[subject] 202 - 528 (528)
1e-117 424   64% RNA polymerase sigma factor sigA CCDC5079_2484 Mycobacterium tuberculosis CCDC5079
21
F2V6Y8_MYCTU
(F2V6Y8)
[query] 24 - 348 (348)
[subject] 202 - 528 (528)
1e-117 424   64% RNA polymerase sigma factor TBPG_02217 Mycobacterium tuberculosis W-148
22
F2GLF3_MYCTU
(F2GLF3)
[query] 24 - 348 (348)
[subject] 202 - 528 (528)
1e-117 424   64% RNA polymerase sigma factor TBSG_01281 Mycobacterium tuberculosis KZN 4207
23
E2W8G4_MYCTU
(E2W8G4)
[query] 24 - 348 (348)
[subject] 202 - 528 (528)
1e-117 424   64% RNA polymerase sigma factor TMKG_03134 Mycobacterium tuberculosis SUMu011
24
E2VKP1_MYCTU
(E2VKP1)
[query] 24 - 348 (348)
[subject] 202 - 528 (528)
1e-117 424   64% RNA polymerase sigma factor TMIG_02203 Mycobacterium tuberculosis SUMu009
25
E2VBM2_MYCTU
(E2VBM2)
[query] 24 - 348 (348)
[subject] 202 - 528 (528)
1e-117 424   64% RNA polymerase sigma factor TMHG_01902 Mycobacterium tuberculosis SUMu008
26
E2UXA0_MYCTU
(E2UXA0)
[query] 24 - 348 (348)
[subject] 202 - 528 (528)
1e-117 424   64% RNA polymerase sigma factor TMGG_02166 Mycobacterium tuberculosis SUMu007
27
E2UP70_MYCTU
(E2UP70)
[query] 24 - 348 (348)
[subject] 202 - 528 (528)
1e-117 424   64% RNA polymerase sigma factor TMFG_03601 Mycobacterium tuberculosis SUMu006
28
E2U1V1_MYCTU
(E2U1V1)
[query] 24 - 348 (348)
[subject] 202 - 528 (528)
1e-117 424   64% RNA polymerase sigma factor TMDG_00417 Mycobacterium tuberculosis SUMu004
29
E2TCL1_MYCTU
(E2TCL1)
[query] 24 - 348 (348)
[subject] 202 - 528 (528)
1e-117 424   64% RNA polymerase sigma factor TMBG_02840 Mycobacterium tuberculosis SUMu002
30
D6FJS6_MYCTU
(D6FJS6)
[query] 24 - 348 (348)
[subject] 202 - 528 (528)
1e-117 424   64% RNA polymerase sigma factor TBNG_03352 Mycobacterium tuberculosis CPHL_A
31
D5Z6N1_MYCTU
(D5Z6N1)
[query] 24 - 348 (348)
[subject] 202 - 528 (528)
1e-117 424   64% RNA polymerase sigma factor TBIG_02057 Mycobacterium tuberculosis GM 1503
32
RPOD_MYCTU
(P0A602)
[query] 24 - 348 (348)
[subject] 202 - 528 (528)
1e-117 424   64% RNA polymerase sigma factor rpoD rpoD
mysA
rpoV
sigA
Rv2703
MT2777
MTCY05A6.24
Mycobacterium tuberculosis
33
RPOD_MYCBO
(P0A603)
[query] 24 - 348 (348)
[subject] 202 - 528 (528)
1e-117 424   64% RNA polymerase sigma factor rpoD rpoD
mysA
rpoV
sigA
Mb2722
Mycobacterium bovis
34
Q59502_MYCBO
(Q59502)
[query] 24 - 348 (348)
[subject] 202 - 528 (528)
1e-117 424   64% RNA polymerase sigma factor rpoV Mycobacterium bovis
35
E9ZMD5_MYCTU
(E9ZMD5)
[query] 24 - 348 (348)
[subject] 204 - 530 (530)
1e-116 424   64% RNA polymerase sigma factor TMMG_02712 Mycobacterium tuberculosis CDC1551A
36
E2WKJ1_MYCTU
(E2WKJ1)
[query] 24 - 348 (348)
[subject] 204 - 530 (530)
1e-116 424   64% RNA polymerase sigma factor TMLG_02417 Mycobacterium tuberculosis SUMu012
37
E2VX99_MYCTU
(E2VX99)
[query] 24 - 348 (348)
[subject] 204 - 530 (530)
1e-116 424   64% RNA polymerase sigma factor TMJG_01687 Mycobacterium tuberculosis SUMu010
38
E2TPP8_MYCTU
(E2TPP8)
[query] 24 - 348 (348)
[subject] 204 - 530 (530)
1e-116 424   64% RNA polymerase sigma factor TMCG_01951 Mycobacterium tuberculosis SUMu003
39
A3PYI3_MYCSJ
(A3PYI3)
[query] 24 - 348 (348)
[subject] 154 - 480 (480)
1e-116 424   65% RNA polymerase sigma factor Mjls_2174 Mycobacterium sp. (strain JLS)
40
E2UCK2_MYCTU
(E2UCK2)
[query] 24 - 348 (348)
[subject] 87 - 413 (413)
1e-116 424   64% RNA polymerase sigma factor TMEG_03382 Mycobacterium tuberculosis SUMu005
41
E1HCE9_MYCTU
(E1HCE9)
[query] 24 - 348 (348)
[subject] 87 - 413 (413)
1e-116 424   64% RNA polymerase sigma factor TMAG_03090 Mycobacterium tuberculosis SUMu001
42
C8XG60_NAKMY
(C8XG60)
[query] 19 - 348 (348)
[subject] 116 - 448 (448)
1e-116 424   63% RNA polymerase sigma factor Namu_3764 Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104)
Microsphaera multipartita
43
Q1B9Z1_MYCSS
(Q1B9Z1)
[query] 24 - 348 (348)
[subject] 154 - 480 (480)
1e-116 424   65% RNA polymerase sigma factor Mmcs_2185 Mycobacterium sp. (strain MCS)
44
A1UF21_MYCSK
(A1UF21)
[query] 24 - 348 (348)
[subject] 154 - 480 (480)
1e-116 424   65% RNA polymerase sigma factor Mkms_2231 Mycobacterium sp. (strain KMS)
45
F8M3F7_9MYCO
(F8M3F7)
[query] 24 - 348 (348)
[subject] 202 - 528 (528)
1e-116 424   64% RNA polymerase sigma factor SIGA (SIGMA-A) sigA
MAF_27070
Mycobacterium africanum GM041182
46
Q5YT84_NOCFA
(Q5YT84)
[query] 24 - 348 (348)
[subject] 128 - 454 (454)
1e-116 424   65% RNA polymerase sigma factor sigA
NFA_37590
Nocardia farcinica
47
C0ZYT9_RHOE4
(C0ZYT9)
[query] 24 - 348 (348)
[subject] 126 - 452 (452)
1e-116 423   65% RNA polymerase sigma factor sigA
RER_28160
Rhodococcus erythropolis (strain PR4 / NBRC 100887)
48
B2HLZ7_MYCMM
(B2HLZ7)
[query] 24 - 348 (348)
[subject] 175 - 501 (501)
1e-116 423   64% RNA polymerase sigma factor sigA
MMAR_2011
Mycobacterium marinum (strain ATCC BAA-535 / M)
49
E5XMD4_9ACTO
(E5XMD4)
[query] 24 - 348 (348)
[subject] 126 - 452 (452)
1e-116 423   65% RNA polymerase sigma factor HMPREF9336_00654 Segniliparus rugosus ATCC BAA-974
50
C3JLL5_RHOER
(C3JLL5)
[query] 24 - 348 (348)
[subject] 104 - 430 (430)
1e-116 423   65% RNA polymerase sigma factor RHOER0001_6281 Rhodococcus erythropolis SK121
accessionDBtoolalignmentEvalueScoreIdent.linkinformationpubmed
1
Q8KUI1_ACTPA
(Q8KUI1)
[query] 1 - 348 (348)
[subject] 1 - 348 (348)
0.0 689   100%
Product
RNA polymerase sigma factor
Gene
asm31
Organism
Actinosynnema pretiosum subsp. auranticum
1uniprot[Pubmed] 12060743 [Medline] 22056096
The biosynthetic gene cluster of the maytansinoid antitumor agent ansamitocin from Actinosynnema pretiosum.(Proc. Natl. Acad. Sci. U.S.A.) [2002]
2
C6W8L5_ACTMD
(C6W8L5)
[query] 1 - 348 (348)
[subject] 1 - 349 (349)
0.0 660   97%
Product
RNA polymerase sigma factor
Gene
Amir_3204
Organism
Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971)
1uniprot
Complete genome sequence of Actinosynnema mirum type strain (101).(Stand. Genomic Sci.) [2009]
3
Q73W40_MYCPA
(Q73W40)
[query] 24 - 348 (348)
[subject] 183 - 509 (509)
1e-118 429   65%
Product
RNA polymerase sigma factor
Gene
sigA
MAP_2820
Organism
Mycobacterium paratuberculosis
1uniprot[Pubmed] 16116077
The complete genome sequence of Mycobacterium avium subspecies paratuberculosis.(Proc. Natl. Acad. Sci. U.S.A.) [2005]
5
Q59532_MYCLE
(Q59532)
[query] 24 - 348 (348)
[subject] 248 - 574 (574)
1e-118 427   65%
Product
RNA polymerase sigma factor
Gene
rpoT
ML1022
Organism
Mycobacterium leprae
1uniprot[Pubmed] 11234002 [Medline] 21128732
Massive gene decay in the leprosy bacillus.(Nature) [2001]
6
B8ZQV8_MYCLB
(B8ZQV8)
[query] 24 - 348 (348)
[subject] 248 - 574 (574)
1e-118 427   65%
Product
RNA polymerase sigma factor
Gene
rpoT
MLBr01022
Organism
Mycobacterium leprae (strain Br4923)
1uniprot[Pubmed] 19881526
Comparative genomic and phylogeographic analysis of Mycobacterium leprae.(Nat. Genet.) [2009]
11
Q59552_MYCSM
(Q59552)
[query] 24 - 348 (348)
[subject] 140 - 466 (466)
1e-117 426   65%
Product
RNA polymerase sigma factor
Gene
mysA
Organism
Mycobacterium smegmatis
1uniprot[Pubmed] 7746156 [Medline] 95264921
Characterization of RNA polymerase and two sigma-factor genes from Mycobacterium smegmatis.(Mol. Microbiol.) [1995]
12
D6ZER0_SEGRD
(D6ZER0)
[query] 24 - 348 (348)
[subject] 115 - 441 (441)
1e-117 425   66%
Product
RNA polymerase sigma factor
Gene
Srot_0961
Organism
Segniliparus rotundus (strain ATCC BAA-972 / CDC 1076 / CIP 108378 / DSM 44985 / JCM 13578)
1uniprot
Complete genome sequence of Segniliparus rotundus type strain (CDC 1076T).(Stand. Genomic Sci.) [2010]
13
Q60158_MYCBO
(Q60158)
[query] 24 - 348 (348)
[subject] 202 - 528 (528)
1e-117 424   64%
Product
RNA polymerase sigma factor
Gene
rpoV
Organism
Mycobacterium bovis
1uniprot[Pubmed] 7644534 [Medline] 95372414
Mutation of the principal sigma factor causes loss of virulence in a strain of the Mycobacterium tuberculosis complex.(Proc. Natl. Acad. Sci. U.S.A.) [1995]
15
C1AFG2_MYCBT
(C1AFG2)
[query] 24 - 348 (348)
[subject] 202 - 528 (528)
1e-117 424   64%
Product
RNA polymerase sigma factor
Gene
sigA
JTY_2710
Organism
Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019)
1uniprot[Pubmed] 19200449
Whole genome sequence analysis of Mycobacterium bovis bacillus Calmette-Guerin (BCG) Tokyo 172: a comparative study of BCG vaccine substrains.(Vaccine) [2009]
18
A1KM41_MYCBP
(A1KM41)
[query] 24 - 348 (348)
[subject] 202 - 528 (528)
1e-117 424   64%
Product
RNA polymerase sigma factor
Gene
sigA
BCG_2716
Organism
Mycobacterium bovis (strain BCG / Pasteur 1173P2)
1uniprot[Pubmed] 17372194
Genome plasticity of BCG and impact on vaccine efficacy.(Proc. Natl. Acad. Sci. U.S.A.) [2007]
32
RPOD_MYCTU
(P0A602)
[query] 24 - 348 (348)
[subject] 202 - 528 (528)
1e-117 424   64%
Product
RNA polymerase sigma factor rpoD
Gene
rpoD
mysA
rpoV
sigA
Rv2703
MT2777
MTCY05A6.24
Organism
Mycobacterium tuberculosis
1uniprot[Pubmed] 7489918 [Medline] 96084954
Genomic organization of the mycobacterial sigma gene cluster.(Gene) [1995]
2uniprot[Pubmed] 7644534 [Medline] 95372414
Mutation of the principal sigma factor causes loss of virulence in a strain of the Mycobacterium tuberculosis complex.(Proc. Natl. Acad. Sci. U.S.A.) [1995]
3uniprot[Pubmed] 9634230 [Medline] 98295987
Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence.(Nature) [1998]
4uniprot[Pubmed] 12218036 [Medline] 22206494
Whole-genome comparison of Mycobacterium tuberculosis clinical and laboratory strains.(J. Bacteriol.) [2002]
5uniprot[Pubmed] 19099550
targetTB: a target identification pipeline for Mycobacterium tuberculosis through an interactome, reactome and genome-scale structural analysis.(BMC Syst. Biol.) [2008]
[pubmed all]
33
RPOD_MYCBO
(P0A603)
[query] 24 - 348 (348)
[subject] 202 - 528 (528)
1e-117 424   64%
Product
RNA polymerase sigma factor rpoD
Gene
rpoD
mysA
rpoV
sigA
Mb2722
Organism
Mycobacterium bovis
1uniprot[Pubmed] 12788972 [Medline] 22709107
The complete genome sequence of Mycobacterium bovis.(Proc. Natl. Acad. Sci. U.S.A.) [2003]
34
Q59502_MYCBO
(Q59502)
[query] 24 - 348 (348)
[subject] 202 - 528 (528)
1e-117 424   64%
Product
RNA polymerase sigma factor
Gene
rpoV
Organism
Mycobacterium bovis
1uniprot[Pubmed] 7644534 [Medline] 95372414
Mutation of the principal sigma factor causes loss of virulence in a strain of the Mycobacterium tuberculosis complex.(Proc. Natl. Acad. Sci. U.S.A.) [1995]
46
Q5YT84_NOCFA
(Q5YT84)
[query] 24 - 348 (348)
[subject] 128 - 454 (454)
1e-116 424   65%
Product
RNA polymerase sigma factor
Gene
sigA
NFA_37590
Organism
Nocardia farcinica
1uniprot[Pubmed] 15466710
The complete genomic sequence of Nocardia farcinica IFM 10152.(Proc. Natl. Acad. Sci. U.S.A.) [2004]
47
C0ZYT9_RHOE4
(C0ZYT9)
[query] 24 - 348 (348)
[subject] 126 - 452 (452)
1e-116 423   65%
Product
RNA polymerase sigma factor
Gene
sigA
RER_28160
Organism
Rhodococcus erythropolis (strain PR4 / NBRC 100887)
1uniprot
Sequence analysis of three plasmids harboured in Rhodococcus erythropolis strain PR4.(Environ. Microbiol.) [2006]
48
B2HLZ7_MYCMM
(B2HLZ7)
[query] 24 - 348 (348)
[subject] 175 - 501 (501)
1e-116 423   64%
Product
RNA polymerase sigma factor
Gene
sigA
MMAR_2011
Organism
Mycobacterium marinum (strain ATCC BAA-535 / M)
1uniprot[Pubmed] 18403782
Insights from the complete genome sequence of Mycobacterium marinum on the evolution of Mycobacterium tuberculosis.(Genome Res.) [2008]