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Cluster information : Lydicamycin


close this sectionCompound

Entry nameLydicamycin
PKS TypePKS-NRPS hybrid
Starter Unit4-guanidinobutyryl-CoA
Chain Length18
Sugar Unitnone
Classification
ActivityAntibacterial
CompositionC47H74N4O10
Lydicamycin

close this sectionOriginal source

Organism
StrainTP-A0598 (=NBRC 110027)
Contig
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close this sectionPKS/NRPS Module

Lydi_00200
TPA0598_03_00840
0
1 malonyl-CoA
Lydi_00100
TPA0598_03_00740
2 malonyl-CoA
3 methylmalonyl-CoA
Lydi_00110
TPA0598_03_00750
4 malonyl-CoA
5 malonyl-CoA
6 methylmalonyl-CoA
7 malonyl-CoA
Lydi_00120
TPA0598_03_00760
8 malonyl-CoA
9 methylmalonyl-CoA
Lydi_00130
TPA0598_03_00770
10 methylmalonyl-CoA
Lydi_00140
TPA0598_03_00780
11 malonyl-CoA
12 methylmalonyl-CoA
13 malonyl-CoA
Lydi_00150
TPA0598_03_00790
14 malonyl-CoA
15 malonyl-CoA
Lydi_00160
TPA0598_03_00800
16 methylmalonyl-CoA
17 malonyl-CoA
Lydi_00180
TPA0598_03_00820
18 glycine
ACP23..100
KS129..501
AT656..976
DH1022..1186
KR1485..1665
ACP1769..1839
KS35..411
AT572..890
dh936..1101
KR1404..1584
ACP1686..1756
KS1779..2155
AT2322..2638
DH2684..2848
KR3163..3343
ACP3444..3514
KS33..409
AT562..876
dh924..1086
KR1380..1560
ACP1660..1730
KS1751..2128
AT2281..2591
DH2639..2802
KR3109..3289
ACP3390..3460
KS3482..3859
AT4019..4336
dh4381..4544
KR4846..5026
ACP5126..5196
KS5219..5595
AT5778..6094
DH6141..6303
KR6618..6798
ACP6900..6970
KS31..407
AT566..877
dh923..1083
KR1366..1546
ACP1646..1716
KS1738..2114
AT2274..2590
DH2636..2800
KR3114..3294
ACP3394..3464
KS34..410
AT576..891
dh937..1098
KR1404..1584
ACP1687..1757
KS35..409
AT572..884
DH930..1095
ER1418..1724
KR1734..1914
ACP2016..2086
KS2108..2485
AT2645..2960
DH3006..3169
KR3474..3654
ACP3755..3825
KS3847..4221
AT4376..4693
DH4739..4900
KR5208..5388
ACP5492..5562
KS34..394
AT559..871
KR1157..1335
ACP1437..1507
KS1528..1905
AT2061..2378
DH2426..2590
ER2910..3215
KR3225..3405
ACP3508..3578
KS34..409
AT573..889
DH939..1102
KR1425..1605
ACP1709..1779
KS1800..2176
AT2329..2642
kr2950..3112
ACP3191..3261
C16..293
A479..867
PCP955..1022

close this sectionReference

Draft genome sequence of marine-derived Streptomyces sp. TP-A0598, a producer of anti-MRSA antibiotic lydicamycins.
Komaki H, Ichikawa N, Hosoyama A, Fujita N, Igarashi Y
[PMID: 26380643]Stand Genomic Sci. 10 (2015) 58

close this sectionData download

Compound nameGenomic
nucleotide
sequence
Nucleotide
sequences of the
coding regions
Translation of the
coding sequences
List of genes/ORFsGBK
Lydicamycin
Genomic nucleotide sequence
119 KB
Nucleotide sequences of the coding regions
116 KB
Translation of the coding sequences
40 KB
List of genes/ORFs
4 KB

 

 
GenBank format
218 KB

close this sectionHistory

  • 2016-12-27[Release]