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CDS information : Avil_00050


close this sectionLocation

Organism
StrainTü57
Entry nameAvilamycin
Contig
Start / Stop / Direction4,852 / 4,307 / - [in whole cluster]
4,852 / 4,307 / - [in contig]
Locationcomplement(4307..4852) [in whole cluster]
complement(4307..4852) [in contig]
TypeCDS
Length546 bp (181 aa)
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close this sectionAnnotation

Category5.4 hypothetical protein
Producthypothetical protein
Product (GenBank)AviX5
Gene
Gene (GenBank)aviX5
EC number
Keyword
Note
  • It is supposed that this ORF is not involved in avilamycin biosynthesis.
Note (GenBank)
Reference
ACC
PmId
[11410376] Biosynthesis of the orthosomycin antibiotic avilamycin A: deductions from the molecular analysis of the avi biosynthetic gene cluster of Streptomyces viridochromogenes Tu57 and production of new antibiotics. (Chem Biol. , 2001)

close this sectionSequence

selected fasta
>hypothetical protein [AviX5]
MTSHGINAPCAQHGRRYVRPPAEDEPLDPAWRPVDLTRAPFEDRAAEDRAPWPDDRPALC
WWLPTSGVMATRRTTTPHIETLVQQLDGDDDASYAARAQLVDIGRDAILTIIGGLPTLGS
FGRLTAIEVFEEVADPRCCPALIALLDADDPSVREWARGPDRTRRPPTSPRSSTTWPTTP
K
selected fasta
>hypothetical protein [AviX5]
GTGACGTCGCACGGGATCAATGCGCCCTGCGCCCAGCACGGTCGGCGGTACGTCCGCCCG
CCGGCCGAGGACGAGCCGCTCGACCCCGCCTGGCGCCCCGTCGACCTGACACGCGCCCCC
TTCGAAGACCGGGCAGCCGAGGACCGCGCCCCGTGGCCCGACGACCGCCCGGCGCTCTGC
TGGTGGCTCCCCACCTCTGGCGTCATGGCCACCCGGCGCACCACGACCCCCCACATCGAG
ACCCTCGTCCAGCAGCTCGACGGCGACGACGACGCCTCATACGCCGCCCGCGCGCAGCTG
GTCGACATCGGTCGTGACGCAATCCTTACGATCATCGGCGGGCTGCCTACCCTGGGCAGC
TTCGGCCGGCTGACCGCCATCGAGGTCTTCGAAGAGGTAGCAGACCCACGCTGCTGCCCC
GCCCTGATCGCCCTGCTGGACGCTGACGACCCCAGCGTCAGGGAATGGGCGCGGGGCCCT
GACCGAACTCGGCGCCCGCCCACTTCACCGAGATCATCAACGACCTGGCCGACCACGCCC
AAGTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09
show BLAST table
InterPro
Database:interpro:38.0
IPR011989 Armadillo-like helical (Domain)
 [79-157]  7.19999999999999e-06 G3DSA:1.25.10.10
G3DSA:1.25.10.10   ARM-like
SignalP No significant hit
TMHMM No significant hit