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CDS information : Avil_00070


close this sectionLocation

Organism
StrainTü57
Entry nameAvilamycin
Contig
Start / Stop / Direction5,809 / 6,159 / + [in whole cluster]
5,809 / 6,159 / + [in contig]
Location5809..6159 [in whole cluster]
5809..6159 [in contig]
TypeCDS
Length351 bp (116 aa)
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close this sectionAnnotation

Category5.4 hypothetical protein
Producthypothetical protein
Product (GenBank)AviX6
Gene
Gene (GenBank)aviX6
EC number
Keyword
Note
Note (GenBank)
Reference
ACC
PmId
[11410376] Biosynthesis of the orthosomycin antibiotic avilamycin A: deductions from the molecular analysis of the avi biosynthetic gene cluster of Streptomyces viridochromogenes Tu57 and production of new antibiotics. (Chem Biol. , 2001)

close this sectionSequence

selected fasta
>hypothetical protein [AviX6]
MYLARARSWIRPTISACRSKSPARRPSVAAGSEPSVRASTSPSYTEDMNSASGGSTGREP
DASVSSIRAVNSPVSATSGLTSTGVMTARPISVTTCPNGTGGWTSTPLQPFRLPRR
selected fasta
>hypothetical protein [AviX6]
TTGTACCTGGCCCGCGCCCGGTCCTGGATCCGCCCCACGATCTCCGCGTGCCGCTCGAAG
TCGCCTGCCAGACGGCCCAGCGTGGCAGCGGGGTCCGAGCCCAGCGTCAGAGCCTCGACG
TCACCCTCGTACACGGAGGACATGAATTCCGCTTCGGGCGGCAGCACCGGCAGGGAGCCC
GACGCGAGCGTTTCGAGCATCCGGGCCGTGAACAGCCCCGTGTCGGCCACGAGCGGGCTG
ACCAGCACCGGCGTGATGACGGCCCGTCCCATCTCGGTGACGACATGTCCGAACGGCACC
GGCGGCTGGACCTCGACGCCGCTTCAGCCGTTCCGGCTCCCGCGGAGGTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09
show BLAST table
InterPro No significant hit
SignalP
 [1-38]  0.475 Signal
Bacteria, Gram-negative   
 [1-23]  0.611 Signal
Bacteria, Gram-positive   
TMHMM No significant hit