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CDS information : Balhi_00040


close this sectionLocation

Organism
StrainDSM 5908
Entry nameBalhimycin
Contig
Start / Stop / Direction3,011 / 3,976 / + [in whole cluster]
3,011 / 3,976 / + [in contig]
Location3011..3976 [in whole cluster]
3011..3976 [in contig]
TypeCDS
Length966 bp (321 aa)
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close this sectionAnnotation

Category4.1 transcriptional regulator
Producttranscriptional regulator
Product (GenBank)StrR family transcriptional regulator
Gene
Gene (GenBank)bbr
EC number
Keyword
Note
Note (GenBank)
Reference
ACC
PmId
[17693715] The border sequence of the balhimycin biosynthesis gene cluster from Amycolatopsis balhimycina contains bbr, encoding a StrR-like pathway-specific regulator. (J Mol Microbiol Biotechnol. , 2007)
[17873036] Phosphate-controlled regulator for the biosynthesis of the dalbavancin precursor A40926. (J Bacteriol. , 2007)
Related Reference
ACC
Q7WZ87
NITE
A4092_00100
PmId
[17873036] Phosphate-controlled regulator for the biosynthesis of the dalbavancin precursor A40926. (J Bacteriol. , 2007)
[25986904] Two Master Switch Regulators Trigger A40926 Biosynthesis in Nonomuraea sp. Strain ATCC 39727. (J Bacteriol. , 2015)
ACC
Q6ZZH8
NITE
Teicp2_00370
PmId
[22806031] Manipulating the regulatory genes for teicoplanin production in Actinoplanes teichomyceticus. (World J Microbiol Biotechnol. , 2012)
[24161919] Evaluation of heterologous promoters for genetic analysis of Actinoplanes teichomyceticus--Producer of teicoplanin, drug of last defense. (J Biotechnol. , 2013)
[25104028] The pathway-specific regulatory genes, tei15* and tei16*, are the master switches of teicoplanin production in Actinoplanes teichomyceticus. (Appl Microbiol Biotechnol. , 2014)

close this sectionSequence

selected fasta
>transcriptional regulator [StrR family transcriptional regulator]
MDPTRVDIFALPAVEIELSRLSSASSPRTSGEDPEHVETLLSAEGELPPILVHRPTMQVL
DGLHRLKVARVRGDTKILARLVDATESDAFVLAVEANIRHGLPLSLADRKRAAVQIIGTH
PQWSDRRVASATGISAGTVADLRRRAGEDGTEARIGRDGRVRPSDGSERRRLAAELIRSD
PGLSLRQVAKQVGISPETVRDVRGRLERGESPTPDGTRRLPAKPHPLRLSEPDFGRAVDQ
DRLALLERLKSDPALRLNEVGRILLRMLTMHSMDGQEWERILQGVPPHLHGVIAGFARDH
ARVWAEFADHLESRATELAAG
selected fasta
>transcriptional regulator [StrR family transcriptional regulator]
GTGGATCCGACGAGAGTTGACATATTCGCTCTCCCTGCCGTCGAAATCGAGCTGTCCCGG
CTGTCTTCCGCGAGCTCACCGCGAACATCGGGTGAGGATCCGGAGCACGTCGAGACGCTG
TTGTCGGCAGAGGGAGAACTTCCGCCCATTCTCGTTCACCGTCCGACGATGCAGGTGCTC
GACGGCCTGCACCGGTTGAAGGTGGCGCGAGTCCGGGGTGACACGAAAATCCTGGCCAGA
CTGGTCGACGCCACCGAATCGGATGCGTTCGTCCTGGCGGTCGAGGCGAACATCCGGCAC
GGTCTGCCGCTGTCCCTCGCCGATCGCAAGCGTGCGGCCGTCCAGATCATCGGGACGCAT
CCGCAGTGGTCCGATCGGCGGGTGGCCTCGGCGACCGGGATCTCCGCGGGCACGGTGGCC
GACCTGCGCAGGCGCGCGGGAGAGGACGGGACCGAGGCCCGGATCGGGCGGGACGGGCGT
GTCCGCCCGTCCGACGGTTCGGAGCGGAGAAGACTCGCCGCCGAGCTCATCCGCAGCGAT
CCGGGTCTGTCTCTGCGGCAGGTCGCCAAGCAGGTCGGCATCTCCCCGGAGACGGTGCGT
GACGTGCGGGGCCGGCTGGAGCGCGGGGAGAGCCCGACTCCGGACGGGACAAGGAGATTG
CCGGCCAAGCCGCACCCGCTGCGGTTGTCGGAGCCCGACTTCGGCCGTGCCGTGGACCAG
GATCGGCTCGCGCTGCTGGAAAGGCTCAAGAGCGACCCGGCACTGCGGCTGAACGAGGTC
GGCCGGATCCTGCTGCGCATGCTCACCATGCACTCCATGGACGGGCAGGAGTGGGAACGG
ATCCTGCAGGGTGTTCCACCACACCTGCACGGCGTGATCGCCGGGTTCGCCCGGGACCAC
GCCCGGGTCTGGGCGGAGTTCGCCGACCACCTGGAGAGCCGGGCGACCGAGCTGGCCGCG
GGATGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09
show BLAST table
InterPro
Database:interpro:38.0
IPR003115 ParB-like nuclease (Domain)
 [14-98]  3.5e-11 PF02195
PF02195   ParBc
 [14-98]  9.10000425645573e-18 SM00470
SM00470   ParB
 [13-100]  4.09999599045784e-09 SSF110849
SSF110849   ParBc
IPR009057 Homeodomain-like (Domain)
 [100-206]  2.4000006166714e-07 SSF46689
SSF46689   Homeodomain_like
SignalP No significant hit
TMHMM No significant hit