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CDS information : C1027_00060


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Organism
StrainC-1027
Entry nameC-1027
Contig
Start / Stop / Direction5,982 / 7,478 / + [in whole cluster]
5,982 / 7,478 / + [in contig]
Location5982..7478 [in whole cluster]
5982..7478 [in contig]
TypeCDS
Length1,497 bp (498 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category5.4 hypothetical protein
Producthypothetical protein
Product (GenBank)glycerol phosphate ABC transporter
GenesgcB1
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)
  • ORF(-2)
Reference
ACC
PmId
[12183628] Biosynthesis of the enediyne antitumor antibiotic C-1027. (Science. , 2002)

close this sectionSequence

selected fasta
>hypothetical protein [glycerol phosphate ABC transporter]
MRALPGSGGLRMAGDAPTAAGNRRCPPTPIQRPLILRRQTLQAPEAKNGRSPEQPQEERI
VLDVWLANYPFPTYDGRDFLAPLRERAAEFERAHPRYRVDINGHDFWTIPEKVARATAEG
RPPHIAGYYATDSQLARDARRPDGKPVFTSVEAALAGRTEILGHPVVVEDLDPVVRDSYS
FGGELVSLPLTVTTMLCYANSSLLARAGVPELPRTWDEVEAACQAVASVDGGPGHGITWA
NDGWVFQQAVALQNGVLTDQDNGRSGSATTVDVTSDEMLDWVRWWTHLHERGHYLYTGGP
SDWGGAFEAFVQQKVAFTFDSSKAARELIQAGAQAGFEVAVFPLPRNAKAPVAGQPVSGD
SLWLAAGLDETTQDGLLALTQYLISPANAADWHRTNGFVPVTGAAGELLEATGWFDRRPQ
QRVAGEQLKASDRSPAALGALLGDFAAVNEVITAAMDDVLRSGADPAKAFAEAGVAAQQL
LDAYNARNRSGSGTPSAV
selected fasta
>hypothetical protein [glycerol phosphate ABC transporter]
GTGAGGGCTCTGCCGGGAAGTGGCGGATTGCGCATGGCAGGAGATGCCCCGACAGCGGCC
GGGAATCGACGATGTCCCCCGACCCCTATCCAGCGTCCGCTGATCCTCAGGAGGCAGACC
TTGCAGGCTCCAGAAGCGAAGAACGGCCGGTCCCCGGAGCAGCCGCAGGAAGAGCGGATC
GTCCTGGACGTATGGCTGGCGAACTACCCGTTCCCCACCTATGACGGGCGTGACTTCCTC
GCTCCGCTGCGCGAGCGGGCGGCGGAGTTCGAGCGCGCCCACCCCCGATACCGGGTCGAC
ATCAACGGCCACGACTTCTGGACCATCCCCGAGAAGGTGGCGCGCGCCACCGCGGAGGGC
AGGCCTCCGCACATAGCGGGCTACTACGCCACCGACAGCCAGTTGGCGCGGGACGCGCGC
AGGCCCGACGGGAAGCCGGTCTTCACCTCGGTGGAGGCCGCGTTGGCCGGCCGGACGGAG
ATACTGGGACACCCGGTGGTGGTGGAGGACCTCGACCCCGTGGTGCGCGACTCCTACTCG
TTCGGGGGCGAGTTGGTGTCGCTGCCGCTCACGGTCACCACCATGCTCTGCTACGCCAAC
TCCTCCCTCCTCGCGCGCGCCGGTGTTCCGGAGTTGCCCCGTACCTGGGATGAGGTCGAA
GCAGCCTGCCAGGCGGTGGCCAGCGTCGACGGGGGGCCCGGTCACGGAATCACCTGGGCC
AACGACGGCTGGGTTTTCCAGCAGGCCGTCGCCCTTCAGAACGGGGTGCTGACCGATCAG
GACAACGGCCGCTCCGGCTCCGCCACGACGGTGGACGTCACATCGGACGAGATGCTGGAC
TGGGTCCGCTGGTGGACGCACCTCCATGAGCGCGGCCATTACCTCTACACGGGCGGGCCC
TCGGACTGGGGCGGGGCGTTCGAGGCTTTCGTCCAGCAGAAGGTCGCATTCACCTTCGAC
TCGTCCAAGGCCGCCCGGGAACTCATCCAGGCCGGTGCACAGGCCGGTTTCGAGGTCGCG
GTGTTCCCGTTGCCCAGGAACGCGAAGGCCCCGGTAGCGGGCCAGCCCGTCTCGGGAGAC
TCCCTGTGGCTGGCCGCGGGACTCGACGAGACCACGCAGGACGGGCTGCTCGCTCTCACC
CAGTACCTGATCAGCCCGGCCAACGCCGCGGACTGGCACCGCACCAACGGTTTCGTACCG
GTGACCGGCGCGGCCGGGGAACTGCTGGAAGCGACAGGCTGGTTCGACCGCCGGCCGCAG
CAACGGGTGGCCGGGGAGCAGTTGAAGGCGTCCGACCGGTCACCGGCGGCGCTCGGCGCG
CTGCTCGGCGACTTCGCGGCCGTCAACGAGGTCATCACCGCAGCGATGGACGATGTCCTG
CGCAGTGGAGCGGACCCCGCGAAGGCCTTCGCCGAAGCCGGCGTGGCCGCCCAGCAACTG
CTCGATGCCTACAACGCCCGGAACCGCTCCGGATCCGGGACCCCCTCCGCCGTCTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09
show BLAST table
InterPro
Database:interpro:38.0
No significant hit
SignalP No significant hit
TMHMM No significant hit