close all open/close all

CDS information : Calm_00020


close this sectionLocation

Organism
StrainNRRL 15839
Entry nameCalicheamicin
Contig
Start / Stop / Direction880 / 1,827 / + [in whole cluster]
880 / 1,827 / + [in contig]
Location880..1827 [in whole cluster]
880..1827 [in contig]
TypeCDS
Length948 bp (315 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category5.4 hypothetical protein
Producthypothetical protein
Product (GenBank)CalU2
Gene
Gene (GenBank)calU2
EC number
Keyword
Note
Note (GenBank)
Reference
ACC
PmId
[12183629] The calicheamicin gene cluster and its iterative type I enediyne PKS. (Science. , 2002)

close this sectionSequence

selected fasta
>hypothetical protein [CalU2]
MTFGSHARTFAGRPVVDVPVDGPLPTVDGAVSWRFSLWHFDETADYKLSDTFRAAFDRFV
AQAGPSVDSLVVGAWGYAAFNPAPIAQLCAAAPRLPALRALFLGDMTSEECEVSWMKVGD
VSPLLTAYPELEVLRVRGGEDFAFSPVRHARLRELAVETGGLSRAFVGAVLDSDLPALTD
LELWLGASDYGGDAQVSDLAPLLAGERFGALRRLGLRNAEIADDLAEALATAAVVPRLER
LDLSLGTLGDRGAAALFAGQPLKHLTELDLHHHYLSEEMAASVVAALPGVRVDMSDPRKA
DEYDGESYRYTAVSE
selected fasta
>hypothetical protein [CalU2]
GTGACCTTCGGTTCCCACGCGCGGACCTTCGCCGGCCGACCGGTCGTCGACGTCCCGGTC
GACGGGCCGCTGCCCACGGTGGACGGTGCGGTCTCGTGGCGGTTCTCCCTGTGGCACTTC
GACGAGACCGCCGACTACAAGCTCTCGGACACGTTCCGGGCCGCGTTCGACCGGTTCGTC
GCGCAGGCCGGGCCCTCCGTCGACTCCCTCGTCGTCGGCGCGTGGGGGTACGCGGCGTTC
AACCCCGCCCCCATCGCGCAGCTCTGCGCGGCGGCGCCCCGGCTGCCCGCCCTGCGGGCC
CTCTTCCTCGGTGACATGACCAGCGAGGAGTGCGAGGTGTCCTGGATGAAGGTGGGCGAC
GTCAGCCCGCTGCTGACGGCGTACCCGGAGCTGGAGGTGCTGCGGGTCCGCGGCGGCGAG
GACTTCGCGTTCTCCCCGGTGCGGCACGCGCGGCTGCGGGAGCTGGCGGTGGAGACCGGC
GGGTTGTCCCGGGCGTTCGTCGGCGCGGTGCTCGACTCCGACCTGCCCGCGCTGACCGAC
CTGGAGCTGTGGCTCGGCGCCTCCGACTACGGCGGCGACGCGCAGGTGTCCGACCTGGCC
CCACTGCTGGCCGGGGAGCGGTTCGGCGCGCTGCGCCGGCTCGGGCTGCGCAACGCGGAG
ATCGCCGACGACCTCGCCGAGGCCCTGGCGACGGCGGCGGTGGTGCCGCGGCTGGAACGG
CTGGACCTGTCGCTGGGCACGCTCGGCGACCGGGGCGCCGCGGCGCTGTTCGCCGGGCAG
CCGCTGAAACACCTGACGGAGCTGGACCTGCACCACCATTACCTGTCGGAGGAGATGGCC
GCGTCGGTGGTCGCCGCGCTGCCGGGCGTCCGGGTCGACATGTCCGACCCGCGAAAGGCC
GACGAGTACGACGGCGAGAGCTACCGCTACACGGCGGTGTCGGAGTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09
show BLAST table
InterPro
Database:interpro:38.0
No significant hit
SignalP No significant hit
TMHMM No significant hit