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CDS information : Calm_00090


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Organism
StrainNRRL 15839
Entry nameCalicheamicin
Contig
Start / Stop / Direction8,447 / 9,382 / + [in whole cluster]
8,447 / 9,382 / + [in contig]
Location8447..9382 [in whole cluster]
8447..9382 [in contig]
TypeCDS
Length936 bp (311 aa)
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close this sectionAnnotation

Category5.4 hypothetical protein
Producthypothetical protein
Product (GenBank)CalU6
Gene
Gene (GenBank)calU6
EC number
Keyword
Note
Note (GenBank)
Reference
ACC
PmId
[12183629] The calicheamicin gene cluster and its iterative type I enediyne PKS. (Science. , 2002)

close this sectionSequence

selected fasta
>hypothetical protein [CalU6]
MTVTEQGAAAVAPRATPTGRGRIVLGATVAGVLLSVLWSYEFVDHVIGDSVANAMLGRDA
KATAIGGTLAGLVFAFVSGLAGTFTACNIAMAASIGPMSQAGAGGATRSALRSLARPVAW
LTAGMVAVAAVYGFVGVLVGDGLPQLSTASVGGLPVRLVQSMVVFGLIGLAFVYLGLAAL
GVLRDPFAHRPTARVVVLGALVGGFLIGRPYPLFNKLFHWAVETGNPLYGAGAFVLQSIG
NVAVVTALFALIVVLTRGRFVSWLAASPSRTAALTGGMLIALGVFMVVYWDVRLPAMFDY
GWFPTMPYNDR
selected fasta
>hypothetical protein [CalU6]
ATGACTGTCACTGAGCAAGGAGCCGCCGCCGTCGCTCCCCGGGCGACACCGACCGGGCGG
GGACGAATCGTGCTGGGTGCCACGGTCGCCGGCGTGCTGCTGTCGGTGCTGTGGTCCTAC
GAGTTCGTCGACCACGTCATCGGCGACTCGGTGGCCAACGCGATGCTCGGCCGCGACGCC
AAGGCGACCGCGATCGGGGGCACCCTGGCCGGTCTCGTCTTCGCCTTCGTCTCCGGTCTT
GCCGGCACGTTCACCGCCTGCAACATCGCCATGGCGGCGTCCATCGGCCCGATGAGCCAG
GCCGGTGCGGGCGGGGCGACGAGGAGCGCGCTGCGCAGCCTGGCACGGCCGGTGGCCTGG
CTCACGGCCGGCATGGTGGCCGTCGCCGCGGTCTACGGCTTCGTCGGCGTACTGGTCGGC
GACGGGTTGCCGCAACTGTCCACGGCGTCGGTCGGCGGTCTCCCGGTGCGCCTGGTCCAG
TCCATGGTCGTGTTCGGGCTGATCGGGCTGGCCTTCGTCTACCTGGGCCTGGCCGCGCTC
GGGGTGCTGCGGGACCCGTTCGCGCACCGACCGACGGCCCGCGTCGTGGTGCTCGGCGCC
CTTGTCGGCGGCTTCCTGATCGGCCGGCCGTACCCCCTGTTCAACAAGCTCTTCCACTGG
GCCGTGGAGACCGGCAACCCGCTCTACGGCGCCGGCGCGTTCGTCCTGCAGTCCATCGGC
AACGTCGCCGTCGTGACGGCGCTGTTCGCCCTGATCGTGGTGCTCACCCGCGGCCGATTC
GTGAGCTGGCTGGCCGCGAGCCCGTCCCGGACCGCCGCGCTGACCGGCGGGATGCTGATC
GCGCTGGGCGTGTTCATGGTCGTCTACTGGGACGTCCGGCTACCGGCGATGTTCGACTAC
GGATGGTTCCCGACCATGCCGTACAACGACAGGTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09
show BLAST table
InterPro No significant hit
SignalP No significant hit
TMHMM
 [21-43]  Transmembrane (i-o) [63-85]  Transmembrane (o-i) [118-140]  Transmembrane (i-o) [160-182]  Transmembrane (o-i) [195-213]  Transmembrane (i-o) [233-255]  Transmembrane (o-i) [268-290]  Transmembrane (i-o)
Transmembrane 7