close all open/close all

CDS information : Calm_00220


close this sectionLocation

Organism
StrainNRRL 15839
Entry nameCalicheamicin
Contig
Start / Stop / Direction21,423 / 22,826 / + [in whole cluster]
21,423 / 22,826 / + [in contig]
Location21423..22826 [in whole cluster]
21423..22826 [in contig]
TypeCDS
Length1,404 bp (467 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category5.4 hypothetical protein
Producthypothetical protein
Product (GenBank)CalR3
Gene
Gene (GenBank)calR3
EC number
Keyword
Note
Note (GenBank)
Reference
ACC
PmId
[12183629] The calicheamicin gene cluster and its iterative type I enediyne PKS. (Science. , 2002)

close this sectionSequence

selected fasta
>hypothetical protein [CalR3]
MTRPADPSAERRTMVPSKFIFGLSPVGSAALRAAPPSRRPPLAPGGSGLGVRAVVIGSVA
TASLAAGLAAAAGTALRHGRPAGRRRFAREVARTVARLGPTFIKAAQVLGTRRDVVPALL
CDELSMLQDDVPPMDAAQSRAALREVYGDRLDTVFASVEETPVASGSIACVYRATLPDGA
TVAVKLRRPGIGPQMAADLGLLRRGASVVARLPMFRGVPVREVVDSLCESVLGQLDLGRE
GRDLDRLREDLGGVPRVRVPRVHAAASRPAAIVMDFIPDLAVDTGARCPRAMRRTFAAST
LTVVYQMLFINGFVHCDLHPGNLYFTRSGQVVVLDAGFSVQLSDKMRGLFADFFLNMSIG
RGDRCAAIVLESAIGVADDADVPAFTEGVKDLVARSYRLSAKEFSLIAFAGELFDLQRRY
GVAASPELVFPLLSLLVVEGTVRSLDPDIDFQETAKPVLNRALFGIR
selected fasta
>hypothetical protein [CalR3]
CTGACCCGGCCTGCTGACCCCTCGGCAGAAAGGCGCACGATGGTTCCGTCCAAGTTCATC
TTCGGCCTCTCCCCCGTCGGTTCGGCGGCCCTGCGCGCCGCCCCACCCTCCCGACGTCCA
CCGCTCGCACCCGGCGGGTCGGGGTTGGGCGTACGCGCGGTCGTCATCGGTTCGGTGGCG
ACCGCGTCGCTCGCGGCGGGGCTCGCCGCGGCCGCCGGTACGGCGCTCCGGCACGGCCGG
CCGGCCGGTCGCCGCCGCTTTGCCCGGGAGGTCGCGCGGACGGTCGCCCGGCTGGGCCCG
ACGTTCATCAAGGCCGCGCAGGTCCTGGGCACCCGCCGTGACGTCGTGCCGGCGCTGCTC
TGTGACGAGCTGTCCATGTTGCAGGACGACGTGCCGCCGATGGACGCCGCGCAGAGCCGG
GCCGCGCTGCGCGAGGTGTACGGGGACCGCCTGGACACGGTCTTCGCCTCGGTCGAGGAG
ACGCCGGTGGCCAGCGGCAGCATCGCCTGCGTCTACCGGGCGACGCTGCCCGACGGGGCC
ACCGTCGCGGTGAAGCTGCGCCGCCCCGGCATCGGTCCGCAGATGGCCGCCGATCTCGGC
CTGCTGCGCCGGGGCGCCTCGGTGGTCGCCCGACTGCCGATGTTCCGCGGTGTGCCGGTC
CGCGAGGTGGTGGACAGCCTCTGCGAGTCGGTGCTGGGCCAGCTCGACCTCGGCCGCGAG
GGACGCGACCTCGACCGGCTGCGGGAGGACCTGGGCGGGGTCCCGCGGGTACGCGTACCC
CGGGTGCACGCCGCGGCGAGCCGGCCGGCCGCCATCGTGATGGACTTCATCCCCGACCTG
GCCGTCGACACCGGCGCCCGGTGCCCCCGCGCGATGCGCCGGACGTTCGCGGCGTCGACC
CTGACCGTGGTCTACCAGATGCTGTTCATCAACGGCTTCGTCCACTGCGACCTGCATCCC
GGCAACCTCTACTTCACCCGCAGCGGGCAGGTGGTGGTGCTGGACGCGGGCTTCAGCGTC
CAACTGTCGGACAAGATGCGCGGGCTCTTCGCGGACTTCTTCCTCAACATGTCGATCGGG
CGTGGCGACCGCTGCGCCGCGATCGTGCTGGAGAGCGCCATCGGCGTCGCCGACGACGCG
GACGTGCCGGCCTTCACCGAGGGCGTGAAGGACCTGGTCGCCCGCAGCTACCGCCTGTCC
GCCAAGGAGTTCAGCCTGATCGCCTTCGCCGGCGAGCTGTTCGACCTGCAACGCCGGTAC
GGGGTGGCCGCGTCGCCGGAGCTGGTCTTCCCGCTACTGTCGCTGCTCGTCGTGGAGGGC
ACGGTGCGGTCGCTCGACCCGGACATCGACTTCCAGGAGACCGCGAAGCCGGTGCTCAAC
CGGGCGCTGTTCGGCATCCGCTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09
show BLAST table
InterPro
Database:interpro:38.0
IPR004147 UbiB domain (Domain)
 [147-263]  4.00000000000001e-27 PF03109
PF03109   ABC1
IPR011009 Protein kinase-like domain (Domain)
 [156-346]  1.89999859865864e-15 SSF56112
SSF56112   Kinase_like
SignalP No significant hit
TMHMM No significant hit