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CDS information : Calm_00230


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Organism
StrainNRRL 15839
Entry nameCalicheamicin
Contig
Start / Stop / Direction24,506 / 22,968 / - [in whole cluster]
24,506 / 22,968 / - [in contig]
Locationcomplement(22968..24506) [in whole cluster]
complement(22968..24506) [in contig]
TypeCDS
Length1,539 bp (512 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category4.3 transport
Productputative transporter
Product (GenBank)CalT2
Gene
Gene (GenBank)calT2
EC number
Keyword
Note
Note (GenBank)
Reference
ACC
PmId
[12183629] The calicheamicin gene cluster and its iterative type I enediyne PKS. (Science. , 2002)
Family/Domain
FD
IPR000914

close this sectionSequence

selected fasta
>putative transporter [CalT2]
MTGVREQERVTDTHTGTDTLRFLGPVDGGLPDEPAPGCIGTGQILRLLTRQLFAYPTGTD
PGVRPAADAAVEVPTVGNGGISADGRTWRIRLRDGIRWDAQAARALTAGDVVRGIKRTAH
PLARAMRPYLGEIIEGMADYYQAYDEALGHWEAHAPAFAQFQQFTRIPGLRAEGDTVVLR
LTAPANDLVDLLATGFTAAAPREYDYYVPESPELYRCTPSAGPYRIAKRLSPGGDLVLEP
NPRWDPGTDPVRRRTARHIEVVAAADGQPVDPAAGFGVLSWSVPSPAARFAGTGCSYYLA
AGAGGAAEPHAVRHALSWALDRAALAESACAAGADGAATQHGVLQPGHPAAERGADDAPD
AGDPERARRLLDDAGLGEGTRLTLGVPAGSRLGAVAAALVAVLARYGITLVPVPLAPAGG
PGVDVVLHEWVPGWAGDAGRDLVHRMWPSDGRAGDPAEVAREALRATDPGEAATLWRRFD
RLATADLRLVPLLVADWPRTRADGVAAGAARW
selected fasta
>putative transporter [CalT2]
ATGACCGGCGTACGCGAGCAGGAACGCGTCACCGACACGCACACCGGGACGGACACTCTC
CGTTTCCTGGGCCCCGTCGACGGCGGGCTGCCCGACGAGCCGGCCCCGGGCTGCATCGGG
ACCGGGCAGATCCTCCGGCTGCTCACCCGGCAGTTGTTCGCGTACCCCACCGGCACGGAC
CCGGGCGTCCGACCGGCGGCGGACGCGGCCGTGGAAGTGCCCACGGTCGGCAACGGAGGG
ATCAGCGCGGACGGGCGCACCTGGCGCATCCGGCTCCGGGACGGCATCCGCTGGGACGCC
CAGGCGGCCCGGGCGCTGACCGCCGGCGACGTCGTCCGGGGCATCAAGCGCACCGCCCAC
CCCCTCGCCCGCGCGATGCGTCCGTACCTCGGCGAGATCATCGAGGGCATGGCGGACTAC
TACCAGGCGTACGACGAGGCGCTCGGGCACTGGGAGGCGCACGCCCCCGCCTTCGCCCAG
TTCCAGCAGTTCACCCGGATCCCGGGGCTGCGCGCCGAGGGGGACACCGTCGTCCTGCGG
CTCACCGCGCCGGCCAACGACCTCGTCGACCTGCTCGCCACGGGATTCACCGCGGCGGCC
CCCCGCGAGTACGACTACTACGTGCCCGAGAGCCCCGAGCTGTACCGGTGCACGCCCTCC
GCCGGGCCGTACCGCATCGCCAAGCGGCTGTCCCCGGGCGGCGACCTCGTCCTGGAGCCC
AACCCCCGGTGGGATCCGGGCACCGACCCGGTACGCCGGCGCACCGCGCGGCACATCGAG
GTCGTCGCGGCGGCGGACGGCCAGCCGGTCGACCCCGCGGCGGGCTTCGGGGTGCTGTCC
TGGTCGGTGCCGTCGCCGGCGGCCCGGTTCGCCGGCACGGGGTGCAGCTACTACCTCGCC
GCGGGCGCCGGCGGGGCGGCCGAGCCCCACGCCGTACGGCATGCGCTGTCCTGGGCGCTC
GACCGTGCGGCCCTCGCCGAGTCGGCCTGCGCGGCCGGTGCCGACGGCGCCGCCACCCAG
CACGGCGTCCTGCAACCCGGGCACCCGGCGGCGGAACGCGGCGCGGACGACGCACCCGAC
GCCGGCGACCCGGAGCGGGCGAGGCGCCTGCTCGACGACGCCGGGCTGGGGGAGGGCACC
CGACTGACCCTGGGCGTCCCCGCCGGCTCGCGGCTGGGCGCCGTGGCCGCCGCCCTGGTG
GCGGTGCTGGCGCGGTACGGGATCACCCTCGTGCCGGTCCCGCTGGCCCCCGCCGGCGGG
CCGGGCGTCGACGTCGTGCTGCACGAGTGGGTGCCCGGCTGGGCCGGCGACGCCGGCCGC
GACCTGGTGCACCGGATGTGGCCGTCCGACGGCCGCGCCGGTGACCCCGCCGAGGTGGCG
CGGGAGGCGCTGCGGGCCACGGACCCGGGTGAGGCGGCGACGCTGTGGCGTCGCTTCGAC
AGGTTGGCCACCGCCGACCTGCGGCTCGTGCCCCTGCTCGTGGCGGACTGGCCGCGGACC
CGGGCCGACGGCGTGGCCGCCGGGGCGGCCCGGTGGTAG

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09
show BLAST table
InterPro
Database:interpro:38.0
IPR000914 Bacterial extracellular solute-binding protein, family 5 (Domain)
 [81-436]  1.8e-26 PF00496
PF00496   SBP_bac_5
SignalP No significant hit
TMHMM No significant hit