close all open/close all

CDS information : Calm_00550


close this sectionLocation

Organism
StrainNRRL 15839
Entry nameCalicheamicin
Contig
Start / Stop / Direction64,779 / 66,461 / + [in whole cluster]
64,779 / 66,461 / + [in contig]
Location64779..66461 [in whole cluster]
64779..66461 [in contig]
TypeCDS
Length1,683 bp (560 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category4.3 transport
Productputative transporter
Product (GenBank)CalT7
Gene
Gene (GenBank)calT7
EC number
Keyword
Note
Note (GenBank)
Reference
ACC
PmId
[12183629] The calicheamicin gene cluster and its iterative type I enediyne PKS. (Science. , 2002)
Family/Domain
FD
IPR000914

close this sectionSequence

selected fasta
>putative transporter [CalT7]
MTQARSATTTNDTRLRGTLRLLGPAAVHQADPAAAWSPAERQLLRLCTRQLISYRPEPDP
GDWRALAPVADLATDVPSTYNAGLGASHRSYVVHLRPGVLWDTPTPRPVTAHDVVRGFKR
LANPLTRHPALAYFRGTLRGMGRYCDEYAAAVAGHPVTAALLAGFQDAHEIPGVFAVDDE
TVVFELDRPALDFVDMLAQSGASPAPVEYDAHLPGSAGLHEHLVANGPYRVVSWRPGGTI
RLEPNPAWRAETDPIRERRFDAVEFRVAMGGPRELADRLAADDADLPWGVPIGPVPGQRL
DPCLVFNLRDPANPAVADAAVRRVVAGAVDRAALVRIARAADPWSEVRAAHTVVPPGNDG
HRQPDPLTDPIPDADADPRERLAAAGHPDGLTLTAVHPDTAEDLALARSWAADLGAAGID
VRLVALDDANHRALLAATGDAPGLRWDLATATFTAPWAYGNARVFLQPLVGEGPGNPGGY
RDPGVDRVVERALDAADPREAVALWQEVERRLLADAAVVPLLFRRATDAAPRGPRVRRAT
ALPALAGLPDLADVRLGVDR
selected fasta
>putative transporter [CalT7]
GTGACGCAGGCGCGCAGTGCAACGACGACGAACGACACCCGGCTGCGGGGCACCCTGCGG
CTGCTCGGGCCCGCCGCCGTCCACCAGGCGGACCCGGCCGCCGCCTGGTCGCCGGCCGAG
CGCCAGTTGCTGCGGCTGTGCACCCGGCAGCTGATCAGCTACCGCCCGGAACCCGACCCG
GGCGACTGGCGCGCCCTCGCGCCGGTCGCCGACCTGGCCACCGACGTCCCCTCGACCTAC
AACGCCGGCCTGGGCGCCAGCCACCGCAGCTACGTGGTGCACCTGCGCCCCGGGGTGCTC
TGGGACACGCCGACCCCCCGCCCGGTGACGGCGCACGACGTCGTACGCGGCTTCAAGCGG
CTGGCCAACCCGCTCACCCGACACCCCGCGCTGGCGTACTTCCGGGGCACCCTGCGGGGC
ATGGGCCGGTACTGCGACGAGTACGCGGCGGCGGTCGCCGGCCACCCGGTCACCGCGGCG
CTGCTCGCCGGCTTCCAGGACGCCCACGAGATCCCCGGCGTGTTCGCCGTCGACGACGAG
ACGGTGGTCTTCGAGCTGGACCGTCCGGCGCTGGACTTCGTCGACATGCTGGCGCAGAGC
GGCGCCTCCCCGGCCCCGGTGGAGTACGACGCACACCTGCCGGGAAGCGCCGGCCTGCAC
GAGCACCTGGTCGCCAACGGCCCGTACCGCGTCGTGTCGTGGCGCCCCGGGGGCACCATC
CGGCTGGAGCCGAACCCGGCGTGGCGGGCGGAGACCGACCCGATCCGCGAGCGGCGGTTC
GACGCCGTCGAGTTCCGCGTCGCCATGGGCGGGCCGCGCGAACTGGCCGACCGGCTCGCC
GCCGACGACGCCGACCTGCCGTGGGGCGTGCCGATCGGCCCGGTGCCCGGTCAGCGGCTC
GACCCGTGCCTGGTGTTCAACCTGCGCGACCCCGCCAACCCGGCCGTCGCCGACGCCGCG
GTGCGCCGGGTCGTCGCCGGGGCGGTCGACCGGGCGGCGCTGGTGCGCATCGCCCGGGCC
GCCGACCCGTGGTCCGAGGTCCGCGCCGCGCACACCGTCGTGCCGCCCGGCAACGACGGG
CACCGGCAGCCCGACCCGCTCACCGACCCGATTCCCGACGCCGACGCGGACCCGCGCGAG
CGGCTCGCCGCCGCGGGGCACCCGGACGGGCTCACCCTGACCGCGGTGCACCCCGACACG
GCCGAGGACCTGGCGCTGGCCCGCTCGTGGGCGGCCGACCTCGGCGCCGCCGGCATCGAC
GTACGCCTGGTCGCGCTCGACGACGCCAACCACCGGGCCCTGCTCGCCGCCACGGGCGAC
GCGCCCGGCCTGCGATGGGACCTGGCGACCGCCACGTTCACCGCGCCGTGGGCCTACGGC
AACGCCCGGGTGTTCCTGCAACCGCTGGTCGGCGAGGGACCCGGCAACCCCGGCGGCTAC
CGCGACCCCGGGGTTGACCGGGTGGTCGAGCGCGCGCTGGACGCGGCCGACCCGCGCGAG
GCGGTCGCCCTGTGGCAGGAGGTGGAGCGGCGGCTGCTCGCCGACGCCGCGGTCGTACCC
CTGCTGTTCCGGCGGGCCACGGACGCCGCGCCGCGCGGGCCCCGGGTGCGGCGCGCGACC
GCCCTGCCGGCGCTCGCCGGCCTGCCCGACCTCGCCGACGTGCGGCTCGGGGTGGACCGG
TGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09
show BLAST table
InterPro
Database:interpro:38.0
IPR000914 Bacterial extracellular solute-binding protein, family 5 (Domain)
 [86-476]  2.89999999999999e-49 PF00496
PF00496   SBP_bac_5
SignalP No significant hit
TMHMM No significant hit