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CDS information : Dynm_00040


close this sectionLocation

Organism
StrainATCC 53710 (=NBRC 15963)
Entry nameDynemicin
Contig
Start / Stop / Direction7,016 / 6,369 / - [in whole cluster]
7,016 / 6,369 / - [in contig]
Locationcomplement(6369..7016) [in whole cluster]
complement(6369..7016) [in contig]
TypeCDS
Length648 bp (215 aa)
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close this sectionAnnotation

Category5.1 general function
Productputative oxidoreductase
Product (GenBank)hypothetical protein
Gene
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)
  • ORF5
Reference
ACC
PmId
[18328078] The biosynthetic genes encoding for the production of the dynemicin enediyne core in Micromonospora chersina ATCC53710. (FEMS Microbiol Lett. , 2008)
Family/Domain
FD
IPR004455

close this sectionSequence

selected fasta
>putative oxidoreductase [hypothetical protein]
MAEAGEVMKIGIIGSGHIGGTLTRRLRTLGHDVTVANSRGPQSLTDLATETGATAGTLEE
AVQDAELVVIAVPVKAVPDLPAALFDGKLVVDADNYYPQRDGDIPELLDRSLSSSRWTAD
HLKGARVVKVFNNIQAAHLMDAGKPAGTPGRIALPVAGDDADAKRVVMQLVDDLGFDPVD
GGTLDESWRQQPDTPVYGTDRDADGVRQGLAEARP
selected fasta
>putative oxidoreductase [hypothetical protein]
TTGGCGGAGGCAGGAGAGGTCATGAAGATCGGAATCATCGGGTCGGGGCACATCGGCGGC
ACCCTCACCCGTCGACTGCGCACGCTGGGCCACGACGTCACGGTGGCCAACTCGCGGGGG
CCGCAGAGCCTGACCGACCTGGCCACGGAGACCGGCGCGACGGCCGGCACCCTGGAGGAG
GCCGTCCAGGACGCGGAGCTCGTCGTCATCGCCGTCCCGGTCAAGGCGGTGCCGGACCTG
CCGGCGGCGCTCTTCGACGGCAAGCTGGTCGTCGACGCCGACAACTACTACCCCCAGCGG
GACGGCGACATCCCCGAGCTGCTCGACCGCAGCCTCAGCTCCAGCCGCTGGACGGCGGAC
CACCTCAAGGGCGCCCGCGTCGTGAAGGTCTTCAACAACATCCAGGCCGCGCACCTCATG
GACGCCGGCAAACCGGCGGGCACCCCGGGCCGCATCGCGCTGCCGGTGGCCGGGGACGAC
GCCGACGCGAAGCGGGTCGTCATGCAGCTGGTGGACGACCTCGGCTTCGACCCGGTGGAC
GGCGGCACGCTCGACGAGAGCTGGCGGCAGCAGCCGGACACCCCGGTCTACGGCACCGAC
CGCGACGCGGACGGCGTACGGCAGGGGCTGGCCGAGGCGCGACCCTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09
show BLAST table
InterPro
Database:interpro:38.0
IPR004455 NADP oxidoreductase, coenzyme F420-dependent (Family)
 [9-95]  1.6e-20 PF03807
PF03807   F420_oxidored
IPR016040 NAD(P)-binding domain (Domain)
 [8-210]  8.1e-69 G3DSA:3.40.50.720
G3DSA:3.40.50.720   NAD(P)-bd
SignalP No significant hit
TMHMM No significant hit