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CDS information : Dynm_00080


close this sectionLocation

Organism
StrainATCC 53710 (=NBRC 15963)
Entry nameDynemicin
Contig
Start / Stop / Direction14,799 / 15,254 / + [in whole cluster]
14,799 / 15,254 / + [in contig]
Location14799..15254 [in whole cluster]
14799..15254 [in contig]
TypeCDS
Length456 bp (151 aa)
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close this sectionAnnotation

Category5.4 hypothetical protein
Producthypothetical protein
Product (GenBank)hypothetical protein
Gene
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)
  • ORF9
Reference
ACC
PmId
[18328078] The biosynthetic genes encoding for the production of the dynemicin enediyne core in Micromonospora chersina ATCC53710. (FEMS Microbiol Lett. , 2008)

close this sectionSequence

selected fasta
>hypothetical protein [hypothetical protein]
MATMQPFNPWIWRDPSALAGGYEQTRPDDVPRQRSDGGADDGPDAPGPGTPIDLTGYLVE
ATDGRIGAIDQASDDAGAGYLVVDTGPWIFGRKVLLPVGTVARVDHLERVVHVDRTREQV
KESPAFDPDDFGRTEYREQVGNYYTESYRRG
selected fasta
>hypothetical protein [hypothetical protein]
GTGGCCACCATGCAGCCGTTCAATCCGTGGATCTGGCGGGACCCGTCCGCCCTCGCCGGC
GGCTACGAGCAGACCCGCCCGGACGACGTGCCGCGGCAGCGGTCGGACGGTGGCGCCGAC
GACGGCCCCGACGCGCCCGGCCCGGGCACTCCGATCGACCTCACCGGCTACCTGGTGGAG
GCGACCGACGGCCGGATCGGCGCGATCGACCAGGCGAGCGACGACGCCGGCGCCGGCTAC
CTGGTGGTGGACACCGGGCCGTGGATCTTCGGTCGGAAGGTGCTGCTGCCGGTCGGCACG
GTGGCCCGGGTCGACCACCTGGAGCGCGTCGTGCACGTGGACCGGACGCGGGAGCAGGTC
AAGGAGTCACCGGCGTTCGACCCGGACGACTTCGGCCGCACCGAATACCGCGAGCAGGTT
GGCAACTACTACACCGAGAGCTACCGGCGGGGCTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09
show BLAST table
InterPro
Database:interpro:38.0
IPR011033 PRC-barrel-like (Domain)
 [53-150]  2.10000267834031e-17 SSF50346
SSF50346   PRCH_cytoplasmic
SignalP No significant hit
TMHMM No significant hit