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CDS information : Dynm_00160


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Organism
StrainATCC 53710 (=NBRC 15963)
Entry nameDynemicin
Contig
Start / Stop / Direction23,898 / 25,796 / + [in whole cluster]
23,898 / 25,796 / + [in contig]
Location23898..25796 [in whole cluster]
23898..25796 [in contig]
TypeCDS
Length1,899 bp (632 aa)
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close this sectionAnnotation

Category5.3 uncharacterized protein (biosynthesis involved)
Producthypothetical protein
Product (GenBank)DynU14
GenedynU14
unbV
Gene (GenBank)
EC number
Keyword
  • enediyne core
Note
Note (GenBank)
  • hypothetical protein; CalU14-like protein
Reference
ACC
PmId
[18328078] The biosynthetic genes encoding for the production of the dynemicin enediyne core in Micromonospora chersina ATCC53710. (FEMS Microbiol Lett. , 2008)
[12536216] A genomics-guided approach for discovering and expressing cryptic metabolic pathways. (Nat Biotechnol. , 2003)

close this sectionSequence

selected fasta
>hypothetical protein [DynU14]
MPSPHRARRIIAPLLAVLIATTLGLASRLPDASAADRRALAGRFAFDVGDLNADPAGART
QRTVEPALEHLRAWISSVGAGAALADLDGDGLPNDTCLVDPRDDSVSVTPTPDRATRYAA
FPLRPTGVPYDTGITAPMGCATADLNEDGRLDVLVYYWGRAPLAWLQRADVPFGPAAFTA
VDVTDRPTELWNSTTANVLDLDGDGHLDIVVGNYFPDGARVLDAAAKDDPRMRMQDSMSW
ARNGGRNRILRFTGLTPVAGGPARPTYADASAALTDEQARSWTLAIGGQDLDGDNLPEVY
VANDFGRDYLLHNVSQPGRIRFAELPGRRDADMPKSKVLGNDSFKSMGVTFTDLNADQRP
DILVSNITTPYALQESNFAFVSTDAAPLTDHAPYRDESQRLGLARTGWAWDIKVADFDGD
GTDEIVQALGFLRGTVNRWAELQELAMGNDVFLQYPYAWPNFRDGDDIAGHQRNPFFVRG
DDGRYVDVSDRLAFRQHATTRGLAVGDTDHDGRLDLVVANQWARSQFLHNTGPARAHLGL
QLLLPATVPGGKPRPAVGATVQVRRADGTALTAQLYPANGHTGGNSPDLLFGLGDSSGPV
TATVTWRDAAGQHAMTRSLNPGWHTLVLTPTA
selected fasta
>hypothetical protein [DynU14]
ATGCCCAGTCCCCACCGCGCCCGCAGGATCATCGCCCCGCTGCTGGCCGTCCTCATCGCC
ACGACCCTCGGGCTGGCCTCCCGGCTGCCGGACGCCAGCGCCGCCGACCGCCGGGCGCTG
GCCGGGCGGTTCGCCTTCGACGTCGGCGACCTGAACGCCGACCCGGCCGGCGCCCGCACC
CAGCGGACCGTGGAACCCGCCCTCGAACACCTGCGGGCGTGGATCTCCTCGGTGGGCGCC
GGGGCGGCGCTGGCCGACCTCGACGGGGACGGCCTGCCCAACGACACCTGCCTCGTCGAC
CCCCGGGACGACTCGGTGAGCGTCACCCCGACCCCGGACCGGGCCACCCGCTACGCCGCC
TTCCCCCTGCGCCCCACCGGGGTGCCCTACGACACGGGGATCACCGCGCCGATGGGCTGC
GCGACCGCCGACCTCAACGAGGACGGCCGCCTCGATGTGCTCGTCTACTACTGGGGACGG
GCGCCGCTGGCCTGGCTGCAACGCGCCGACGTGCCGTTCGGGCCGGCCGCGTTCACCGCC
GTCGACGTCACCGACCGCCCCACCGAGCTGTGGAACAGCACCACCGCCAACGTGCTCGAC
CTGGACGGCGACGGCCACCTGGACATCGTGGTCGGCAACTACTTCCCCGACGGGGCGCGG
GTGCTCGACGCGGCCGCGAAGGACGACCCGCGGATGCGGATGCAGGACTCGATGTCCTGG
GCCCGCAACGGCGGGCGCAACCGGATCCTGCGCTTCACCGGCCTCACCCCCGTCGCCGGC
GGCCCGGCCCGCCCCACCTACGCGGACGCCTCCGCGGCCCTCACCGACGAGCAGGCCCGC
TCCTGGACCCTGGCCATCGGCGGCCAGGACCTGGACGGCGACAACCTGCCCGAGGTGTAC
GTGGCGAACGACTTCGGCCGCGACTACCTGCTGCACAACGTCTCGCAGCCGGGCCGGATC
CGGTTCGCCGAGCTGCCCGGGCGGCGCGACGCCGACATGCCGAAGTCCAAGGTGCTCGGC
AACGACTCGTTCAAGAGCATGGGCGTTACCTTCACCGACCTCAACGCCGACCAGCGGCCG
GACATCCTGGTCAGCAACATCACCACCCCGTACGCGCTCCAGGAGAGCAACTTCGCGTTC
GTCAGCACCGACGCCGCCCCGCTCACCGACCACGCTCCCTACCGGGACGAGAGCCAGCGG
CTGGGCCTGGCCCGCACCGGCTGGGCCTGGGACATCAAGGTGGCCGACTTCGACGGCGAC
GGCACCGACGAGATCGTGCAGGCGCTGGGCTTCCTGCGCGGCACGGTGAACCGCTGGGCC
GAACTCCAGGAGCTGGCCATGGGCAACGACGTGTTCCTCCAGTACCCGTACGCCTGGCCG
AACTTCCGCGACGGCGACGACATCGCCGGGCACCAGCGCAACCCGTTCTTCGTGCGGGGC
GACGACGGCCGGTACGTGGACGTCTCCGACCGGCTCGCCTTCCGGCAGCACGCCACCACC
CGCGGCCTGGCCGTCGGCGACACCGACCACGACGGGCGGCTGGACCTGGTGGTGGCCAAC
CAGTGGGCCCGGTCGCAGTTCCTGCACAACACCGGCCCGGCCCGCGCCCACCTCGGGCTG
CAACTGCTGCTCCCGGCCACCGTCCCCGGCGGGAAGCCGCGGCCCGCGGTCGGCGCGACG
GTCCAGGTGCGCCGGGCCGACGGCACCGCGCTGACCGCCCAGCTCTACCCCGCCAACGGC
CACACCGGCGGCAACTCCCCCGACCTGCTCTTCGGGCTCGGCGACTCGTCCGGCCCGGTC
ACCGCCACGGTGACCTGGCGCGACGCCGCCGGCCAGCACGCCATGACCAGGTCCCTGAAC
CCCGGGTGGCACACCCTCGTGCTCACCCCGACCGCGTAG

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09
show BLAST table
InterPro
Database:interpro:38.0
IPR011519 ASPIC/UnbV (Domain)
 [555-628]  1.9e-16 PF07593
PF07593   UnbV_ASPIC
SignalP
 [1-26]  0.832 Signal
Eukaryota   
 [1-34]  0.587 Signal
Bacteria, Gram-positive   
TMHMM No significant hit