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CDS information : Dynm_00310


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Organism
StrainATCC 53710 (=NBRC 15963)
Entry nameDynemicin
Contig
Start / Stop / Direction44,713 / 45,564 / + [in whole cluster]
44,713 / 45,564 / + [in contig]
Location44713..45564 [in whole cluster]
44713..45564 [in contig]
TypeCDS
Length852 bp (283 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category5.4 hypothetical protein
Producthypothetical protein
Product (GenBank)unkown protein
GenedynU16
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)
  • ORF21
Reference
ACC
PmId
[18328078] The biosynthetic genes encoding for the production of the dynemicin enediyne core in Micromonospora chersina ATCC53710. (FEMS Microbiol Lett. , 2008)

close this sectionSequence

selected fasta
>hypothetical protein [unkown protein]
MPDGYLKLPDDWVRVMVSVPAPVDEVWEAVTDPRRVAQWFGHLSAPMTTGASTRVDFGDG
DFFDIEVDHVEPRDRLLFRWSFLGVGPECQVGWTLTGGAEATTLTVDDSCPGRPGSEVAQ
LKAGWLDFVGRLARYLETGKPSRYDWRQEIDGSVVLPNGSWHPLREETVVDWLPIATNGA
GPGWFFVVDEEGPRRFTLRDWQLDRERALTFAVEIPGARTVTACQVRTEPGERGRTLSVS
HQGWHRLGLSDLQERTLRHRFAATWTAALSLAEECARTRQELP
selected fasta
>hypothetical protein [unkown protein]
ATGCCCGACGGATACCTGAAACTGCCCGACGACTGGGTGCGCGTGATGGTCAGCGTGCCG
GCCCCCGTGGACGAGGTGTGGGAGGCGGTCACCGACCCGCGGCGGGTCGCCCAGTGGTTC
GGCCACCTGTCCGCTCCCATGACGACCGGGGCGAGCACCCGTGTCGACTTCGGTGACGGC
GACTTCTTCGACATCGAGGTCGACCACGTCGAGCCGCGCGACCGCCTGCTGTTCCGGTGG
AGCTTCCTCGGCGTCGGCCCGGAGTGCCAGGTCGGCTGGACGCTGACCGGCGGGGCGGAG
GCCACCACGCTGACCGTGGACGACAGCTGCCCGGGCCGCCCCGGGTCGGAGGTGGCCCAG
CTCAAGGCCGGGTGGCTGGACTTCGTCGGCCGGCTGGCCCGCTACCTGGAAACCGGCAAA
CCCTCCCGGTACGACTGGCGGCAGGAGATCGACGGCAGCGTGGTGCTGCCGAACGGCTCC
TGGCACCCGCTGCGCGAGGAGACGGTGGTCGACTGGCTCCCCATCGCCACCAACGGCGCC
GGCCCCGGCTGGTTCTTCGTGGTCGACGAGGAGGGCCCGCGCCGGTTCACCCTGCGCGAC
TGGCAGCTCGACCGCGAGCGGGCGCTCACCTTCGCGGTCGAGATCCCCGGGGCGCGCACG
GTCACCGCCTGCCAGGTCCGGACGGAGCCGGGCGAGCGCGGCCGTACGCTCTCCGTCTCC
CACCAGGGCTGGCACCGGCTGGGCCTCAGCGACCTCCAGGAACGGACGCTGCGGCACCGG
TTCGCCGCCACCTGGACGGCCGCGCTGTCGCTGGCCGAGGAGTGCGCCCGCACCCGGCAG
GAGCTGCCGTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09
show BLAST table
InterPro
Database:interpro:38.0
IPR013538 Activator of Hsp90 ATPase homologue 1-like (Family)
 [20-137]  3.3e-13 PF08327
PF08327   AHSA1
IPR023393 START-like domain (Domain)
 [11-138]  3.7e-24 G3DSA:3.30.530.20
G3DSA:3.30.530.20   G3DSA:3.30.530.20
SignalP No significant hit
TMHMM No significant hit