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CDS information : Epoth_00040


close this sectionLocation

Organism
StrainSo ce90
Entry nameEpothilone
Contig
Start / Stop / Direction5,992 / 5,612 / - [in whole cluster]
5,992 / 5,612 / - [in contig]
Locationcomplement(5612..5992) [in whole cluster]
complement(5612..5992) [in contig]
TypeCDS
Length381 bp (126 aa)
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close this sectionAnnotation

Category5.4 hypothetical protein
Producthypothetical protein
Product (GenBank)unknown
Gene
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)
  • ORF4
Reference
ACC
PmId
[10662695] The biosynthetic gene cluster for the microtubule-stabilizing agents epothilones A and B from Sorangium cellulosum So ce90. (Chem Biol. , 2000)

close this sectionSequence

selected fasta
>hypothetical protein [unknown]
MDKPIGRTRCAIAEGYIPGGSNGPEPQMTSHETACLLNASDRDAQVAITVYFSDRDPAGP
YRVTVPARRTRHVRFNDLTEPEPIPRDTDYASVIESDAPIVVQHTRLDSRQAENALLSTI
AYTDRE
selected fasta
>hypothetical protein [unknown]
ATGGACAAGCCGATCGGGCGGACGCGCTGTGCAATCGCAGAGGGCTACATCCCAGGCGGG
AGCAACGGACCTGAGCCGCAGATGACGAGCCATGAGACGGCCTGCCTGTTGAATGCGTCG
GACCGGGACGCGCAGGTCGCCATCACCGTTTACTTCAGCGACCGCGACCCCGCCGGGCCT
TACCGGGTGACCGTTCCAGCGAGGCGCACCCGGCACGTCCGGTTCAACGATCTGACCGAA
CCCGAGCCGATCCCGCGCGATACGGACTATGCCAGCGTGATCGAATCGGACGCCCCCATC
GTCGTGCAGCATACCCGGCTCGACTCGCGTCAGGCGGAGAACGCGCTGCTCAGCACGATC
GCCTACACGGACCGGGAGTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09
show BLAST table
InterPro
Database:interpro:38.0
IPR009794 Protein of unknown function DUF1362 (Family)
 [1-126]  4.89996723796399e-89 PIRSF008711
PIRSF008711   UCP008711
 [2-125]  3.60000000000002e-59 G3DSA:2.60.290.11
G3DSA:2.60.290.11   DUF1362
 [3-126]  1.40000506907309e-52 SSF89232
SSF89232   DUF1362
 [5-123]  9.60000000000003e-56 PF07100
PF07100   ASRT
SignalP No significant hit
TMHMM No significant hit