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CDS information : Epoth_00160


close this sectionLocation

Organism
StrainSo ce90
Entry nameEpothilone
Contig
Start / Stop / Direction64,363 / 64,920 / + [in whole cluster]
64,363 / 64,920 / + [in contig]
Location64363..64920 [in whole cluster]
64363..64920 [in contig]
TypeCDS
Length558 bp (185 aa)
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close this sectionAnnotation

Category5.4 hypothetical protein
Producthypothetical protein
Product (GenBank)unknown
Gene
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)
  • ORF8
Reference
ACC
PmId
[10662695] The biosynthetic gene cluster for the microtubule-stabilizing agents epothilones A and B from Sorangium cellulosum So ce90. (Chem Biol. , 2000)

close this sectionSequence

selected fasta
>hypothetical protein [unknown]
MLAPPADIRPPAAAQLEPDSPDDEADEADEALRPFRDAIAAYSEAVRWAEAAQRPRLESL
VRLAIVRLGKALDKVPFAHTTAGVSQIAGRLQNDAVWFDVAARYASFRAATEHALRDAAS
AMEALAAGPYRGSSRVSAAVGEFRGEAARLHPADRVPASDQQILTALRAAERALIALYTA
FAREE
selected fasta
>hypothetical protein [unknown]
GTGCTCGCTCCGCCCGCGGACATCCGGCCGCCCGCCGCGGCCCAGCTCGAGCCGGACTCG
CCGGATGACGAGGCCGACGAGGCCGACGAGGCGCTCCGCCCGTTCCGCGACGCGATCGCC
GCGTACTCGGAGGCCGTTCGGTGGGCGGAGGCGGCGCAGCGGCCGCGGCTGGAGAGCCTC
GTGCGGCTCGCGATCGTGCGGCTGGGCAAGGCGCTCGACAAGGTCCCTTTCGCGCACACG
ACGGCCGGCGTCTCCCAGATCGCCGGCAGACTCCAGAACGATGCGGTCTGGTTCGATGTC
GCCGCCCGGTACGCGAGCTTCCGCGCGGCGACGGAGCACGCGCTCCGCGACGCGGCGTCG
GCCATGGAGGCGCTCGCGGCCGGCCCGTACCGCGGATCGAGCCGCGTGTCCGCTGCCGTA
GGGGAGTTTCGGGGGGAGGCGGCGCGCCTTCACCCCGCGGACCGTGTACCCGCGTCCGAC
CAGCAGATCCTGACCGCGCTGCGCGCAGCCGAGCGGGCGCTCATCGCGCTCTACACTGCG
TTCGCCCGTGAGGAGTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09
show BLAST table
InterPro No significant hit
SignalP No significant hit
TMHMM No significant hit