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CDS information : Epoth_00170


close this sectionLocation

Organism
StrainSo ce90
Entry nameEpothilone
Contig
Start / Stop / Direction65,874 / 65,008 / - [in whole cluster]
65,874 / 65,008 / - [in contig]
Locationcomplement(65008..65874) [in whole cluster]
complement(65008..65874) [in contig]
TypeCDS
Length867 bp (288 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category5.4 hypothetical protein
Producthypothetical protein
Product (GenBank)unknown
Gene
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)
  • ORF11
Reference
ACC
PmId
[10662695] The biosynthetic gene cluster for the microtubule-stabilizing agents epothilones A and B from Sorangium cellulosum So ce90. (Chem Biol. , 2000)

close this sectionSequence

selected fasta
>hypothetical protein [unknown]
MTVSSMPRSWSSRVRTVVTALGCARRLSGSISRLRRHPEAGRAPRSRLRAWRRLPQHISS
PWRHLPPGARVGTSCPADRRILPSHRTADLGTSGGTLVARMSGHVARNPHAAVLVGDGSA
RGRRRLSNRRAERRVSDVTCREGGEAMQKIAGKLVVGLISVSGMSLLAACGGEKRSGGEA
QTPGGAQGEAPVPVGSAVDSIVAARCDREARCNNIGQDREYSSKDACSNKIRSEWRDELT
FGECPGGIDAKQLNECLEGIRNEGCGNPFDTLGRVVACRSSDLCRDAR
selected fasta
>hypothetical protein [unknown]
GTGACGGTCTCTTCTATGCCGAGGAGCTGGAGCTCACGAGTGCGCACGGTGGTGACGGCG
CTCGGCTGTGCCCGGCGCCTCTCCGGGAGCATCTCCCGTTTGCGGCGTCACCCCGAGGCT
GGCCGGGCGCCGCGTTCCCGGCTGCGGGCATGGAGGCGCCTGCCGCAGCACATTTCGAGC
CCGTGGCGGCACCTCCCGCCCGGCGCCCGTGTCGGTACCTCCTGCCCGGCCGATCGCAGG
ATATTGCCGTCGCACAGGACAGCCGATCTCGGCACGAGCGGAGGCACGCTAGTCGCAAGG
ATGTCGGGGCATGTTGCGAGAAACCCGCATGCGGCTGTTCTGGTCGGGGACGGTTCTGCT
CGTGGCCGTCGCCGGCTGTCGAACCGACGAGCCGAGCGGAGAGTCTCTGATGTGACGTGT
CGTGAGGGAGGGGAAGCCATGCAAAAGATTGCTGGGAAGCTGGTCGTGGGCCTGATCTCG
GTGTCGGGAATGAGCCTGCTCGCGGCGTGCGGCGGCGAAAAGCGGTCAGGCGGGGAGGCG
CAAACCCCGGGTGGCGCGCAGGGCGAGGCGCCGGTGCCAGTCGGCAGCGCCGTCGATAGC
ATCGTGGCGGCGCGGTGCGACCGCGAGGCGCGGTGCAACAACATCGGACAAGACCGGGAG
TATTCGAGCAAGGACGCGTGCTCGAACAAGATCCGATCCGAGTGGCGCGACGAGCTGACC
TTCGGCGAGTGCCCAGGCGGCATCGACGCCAAGCAGCTGAACGAGTGTCTGGAGGGGATC
CGCAATGAGGGCTGCGGCAATCCGTTCGACACCCTCGGGCGGGTCGTCGCCTGTCGCTCC
AGCGATCTCTGCCGCGACGCGCGCTAG

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09
show BLAST table
InterPro No significant hit
SignalP
 [1-29]  0.745 Signal
Eukaryota   
 [1-36]  0.455 Signal
Bacteria, Gram-positive   
TMHMM No significant hit