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CDS information : FR008_00050


close this sectionLocation

Organism
StrainFR-008
Entry nameFR-008
Contig
Start / Stop / Direction10,254 / 7,210 / - [in whole cluster]
10,254 / 7,210 / - [in contig]
Locationcomplement(7210..10254) [in whole cluster]
complement(7210..10254) [in contig]
TypeCDS
Length3,045 bp (1,014 aa)
Click on the icon to see Genetic map.

close this sectionAnnotation

Category4.1 transcriptional regulator
Productputative LuxR family transcriptional regulator
Product (GenBank)FscRIII
Gene
Gene (GenBank)fscRIII
EC number
Keyword
Note
Note (GenBank)
  • putative transcriptional regulator
Reference
ACC
PmId
[14652074] Organizational and mutational analysis of a complete FR-008/candicidin gene cluster encoding a structurally related polyene complex. (Chem Biol. , 2003)
Related Reference
ACC
Q9L4W0
NITE
Nysta_00180
PmId
[14973031] In vivo analysis of the regulatory genes in the nystatin biosynthetic gene cluster of Streptomyces noursei ATCC 11455 reveals their differential control over antibiotic biosynthesis. (J Bacteriol. , 2004)

close this sectionSequence

selected fasta
>putative LuxR family transcriptional regulator [FscRIII]
MYDLHMPPIELPLLERDRELAALSAVIGELGSGRPAVVTVTGEPGLGQNDLLRWAAAYAT
DAGLRVLSAHATPAEHEVRYGVVAQLLAEENRALAPRLFLTDEQPGGLPGLNGLLNAVRD
RPTLLVVRDTQWLDPASLRWLEALARRLPRAPVALLTSTTGTALTRPEWSVGTPLTGLAT
TIELALPPLTSGGTATAVLRAFGAPGDPAFTEALAEATRGIPAVVHDVLDRFARAGYSPR
ADRIDPLRALTAEVVGDHATRALSDLRDPAAVDALRALAVCGDLLDFPLVCTLAGPHSVS
ESRLRAALAASGLTTLRDGHPRVQDAVVRARVLEEMPAADRAELYARAAGLAQRVAADDQ
GIADLLLLARPVGDPWAVDTLRRGFTSALRGGRRDLAVAYLARALDEPLAAEDRARIEFQ
LASVEMVTAPTAAERRLGGLIRATRPGPGAGLRARATDLCLLGGDTRAARHALAGAIDSA
PAAPEPRRGPTGAPAVPPEAEPASTPRTHLVPHRPYAGTPPGATGPDGRRSAAPDLPGTP
RAHDAPRSPGPEAAGRPDTAGPDEDPAVAERHELTVLCRVASFLRHDDADLDVLPVPALP
DAVHNPAVAGVWAWEHGVAGVHREEVRRLARSAFVPAATGRPLLVVPRLLGCRALLLTDD
GDEAENHLGALLDESHRERAAISVAHILTVRAELHIRHGRPDAAARDLAAAQAELPLDRL
HPLFLPYWLALSMITDLQNGHTERARETAARPLPPLAHESATTAQLLFARGVLARTDDEP
HQAREHFRACGRWLLRHGCANPAVQPWRSLAAEAAHTLGDTEEAARLVHEEVRLARRWGA
AAPLGRAQLSLAVVTEENRVENLRAAVTTLSAASARTAYTRAVIELAAAEREENERRTAV
ALGPAATVLPPVAPPPGPHVPSAVARPPGPRPAVLTGRRTAKAPGHDAAVWHGLTAVERE
TAALAAQGLGNREIATELAVTTRAVELRLSGVYRKLRIRGREELRALVQEAEGS
selected fasta
>putative LuxR family transcriptional regulator [FscRIII]
ATGTATGATCTTCACATGCCGCCCATCGAGCTCCCGCTCCTGGAGCGCGACCGCGAACTG
GCCGCCCTCTCCGCCGTCATCGGCGAGCTCGGATCCGGCCGTCCCGCGGTGGTGACGGTG
ACCGGAGAACCGGGGCTCGGCCAGAACGATCTGCTGCGCTGGGCGGCCGCGTACGCCACC
GACGCCGGACTGCGCGTCCTCAGCGCCCACGCCACCCCCGCCGAACACGAGGTGCGGTAC
GGCGTGGTGGCCCAGCTCCTCGCGGAGGAGAACCGCGCACTCGCCCCGCGCCTCTTCCTC
ACCGACGAGCAGCCCGGCGGGCTGCCGGGCCTCAACGGCCTGCTCAACGCCGTCCGCGAC
CGGCCCACCCTGCTCGTGGTACGCGACACCCAGTGGCTCGACCCGGCCTCCCTGCGCTGG
CTGGAAGCCCTCGCCCGGCGGCTGCCCCGCGCCCCGGTCGCCCTGCTCACCAGCACCACC
GGCACCGCCCTGACCCGGCCCGAGTGGAGCGTCGGCACCCCCCTGACCGGACTGGCCACC
ACCATCGAGCTGGCGCTGCCGCCCCTCACCTCCGGCGGCACCGCCACCGCCGTCCTGCGG
GCCTTCGGCGCCCCGGGGGACCCCGCCTTCACCGAGGCCCTCGCCGAGGCGACCCGGGGC
ATCCCGGCCGTCGTCCACGACGTGCTGGACCGTTTCGCCCGCGCGGGGTACAGCCCCCGG
GCCGACCGGATCGACCCCCTGCGCGCCCTGACCGCGGAGGTCGTCGGCGACCACGCCACC
CGCGCCCTCAGCGACCTGCGCGACCCGGCCGCCGTCGACGCCCTGCGCGCCCTCGCCGTC
TGCGGCGACCTCCTCGACTTCCCCCTCGTCTGCACGCTCGCCGGACCGCACTCCGTCTCC
GAGTCCCGCCTGCGCGCCGCCCTGGCGGCCAGCGGCCTGACCACCCTGCGCGACGGCCAC
CCCCGGGTCCAGGACGCCGTCGTACGCGCCCGCGTCCTGGAGGAGATGCCCGCAGCGGAC
CGGGCCGAGCTGTACGCACGCGCCGCCGGGCTCGCCCAGCGCGTCGCCGCCGACGACCAG
GGCATAGCCGACCTGCTGCTGCTGGCCCGCCCCGTCGGCGACCCCTGGGCCGTCGACACC
CTGCGGCGGGGCTTCACCTCCGCGCTGCGCGGCGGCCGCCGCGACCTGGCCGTCGCCTAC
CTGGCGCGCGCCCTGGACGAACCACTGGCCGCCGAGGACCGCGCCCGGATCGAGTTCCAG
CTGGCCTCCGTGGAGATGGTCACCGCCCCCACGGCCGCCGAACGCCGGCTGGGCGGGCTC
ATCCGGGCCACCCGGCCCGGCCCCGGCGCCGGACTGCGGGCCCGCGCCACCGACCTGTGC
CTCCTCGGCGGAGACACCCGCGCGGCCCGCCACGCCCTCGCCGGAGCCATCGACTCGGCC
CCGGCCGCCCCCGAACCACGACGTGGCCCGACCGGCGCCCCGGCCGTGCCGCCCGAGGCG
GAGCCCGCCTCGACTCCCCGCACCCACCTCGTCCCTCACCGCCCCTACGCGGGCACCCCG
CCCGGCGCCACCGGGCCGGACGGTAGAAGATCCGCCGCGCCGGACCTTCCCGGCACCCCC
CGCGCCCACGACGCCCCCCGCTCTCCCGGCCCCGAGGCCGCAGGACGACCGGACACCGCC
GGGCCGGACGAGGACCCGGCCGTCGCCGAACGGCACGAACTGACCGTCCTGTGCCGCGTC
GCCTCCTTCCTCCGCCACGACGACGCCGACCTCGACGTCCTCCCCGTCCCCGCCCTGCCC
GACGCGGTGCACAACCCGGCCGTCGCGGGGGTCTGGGCCTGGGAACACGGCGTGGCCGGC
GTCCACCGCGAGGAAGTACGCAGACTCGCCCGCTCCGCCTTCGTCCCCGCCGCCACCGGC
CGCCCGCTCCTCGTCGTACCCCGGCTGCTCGGCTGCCGCGCCCTCCTGCTCACCGACGAC
GGCGACGAGGCGGAGAACCACCTCGGTGCCCTGCTCGACGAGTCCCACCGGGAGCGCGCG
GCGATCTCGGTCGCCCACATCCTCACCGTCCGCGCCGAGCTGCACATCCGCCACGGCCGC
CCCGACGCCGCCGCCCGTGACCTGGCCGCCGCCCAGGCGGAACTCCCGCTGGACCGCCTC
CACCCGCTCTTCCTCCCGTACTGGCTCGCCCTGAGCATGATCACCGATCTGCAGAACGGC
CACACCGAACGGGCCCGCGAGACCGCCGCCCGGCCGCTGCCGCCGCTCGCCCACGAGAGC
GCCACCACCGCCCAACTGCTCTTCGCCCGGGGGGTGCTGGCCCGCACGGACGACGAGCCC
CACCAGGCCAGGGAACACTTCCGCGCCTGCGGTCGCTGGCTCCTGCGGCACGGCTGCGCC
AACCCGGCCGTCCAGCCCTGGCGCTCCCTCGCCGCCGAGGCCGCCCACACCCTCGGCGAC
ACCGAGGAGGCCGCCCGGCTGGTCCACGAGGAAGTCCGCCTCGCCCGCCGCTGGGGCGCC
GCCGCCCCGCTCGGCCGCGCCCAGCTCAGCCTCGCCGTCGTCACCGAGGAGAACCGGGTC
GAAAACCTCCGTGCCGCCGTCACCACGCTCAGCGCGGCATCGGCCCGCACCGCCTACACC
CGGGCCGTCATCGAACTGGCCGCCGCCGAACGCGAGGAGAACGAGCGCCGGACCGCCGTC
GCCCTCGGCCCGGCCGCCACGGTGCTCCCGCCGGTCGCCCCACCCCCCGGTCCGCACGTC
CCCTCCGCGGTGGCCAGGCCCCCCGGCCCGCGCCCGGCGGTGCTGACCGGTCGGCGGACC
GCGAAGGCCCCGGGCCACGACGCGGCCGTCTGGCACGGCCTGACCGCCGTCGAACGGGAG
ACCGCGGCCCTCGCCGCCCAGGGCCTGGGCAACCGGGAGATCGCCACGGAACTCGCCGTG
ACCACGCGCGCCGTGGAGCTGCGCCTCAGCGGCGTCTACCGCAAACTCCGCATCCGCGGA
CGTGAGGAACTGCGCGCACTCGTACAAGAAGCGGAGGGCAGCTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09
show BLAST table
InterPro
Database:interpro:38.0
IPR000792 Transcription regulator LuxR, C-terminal (Domain)
 [951-1008]  1.69999922284049e-10 SM00421
SM00421   HTH_LUXR
 [954-1005]  7.19999999999999e-08 PF00196
PF00196   GerE
IPR011990 Tetratricopeptide-like helical (Domain)
 [640-860]  5.69999999999999e-13 G3DSA:1.25.40.10
G3DSA:1.25.40.10   TPR-like_helical
IPR011991 Winged helix-turn-helix transcription repressor DNA-binding (Domain)
 [944-1010]  1.5e-12 G3DSA:1.10.10.10
G3DSA:1.10.10.10   Wing_hlx_DNA_bd
IPR016032 Signal transduction response regulator, C-terminal effector (Domain)
 [942-1011]  1.09999909120787e-11 SSF46894
SSF46894   Bipartite_resp_reg_C-effector
SignalP No significant hit
TMHMM No significant hit