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CDS information : FR008_00100


close this sectionLocation

Organism
StrainFR-008
Entry nameFR-008
Contig
Start / Stop / Direction17,334 / 17,528 / + [in whole cluster]
17,334 / 17,528 / + [in contig]
Location17334..17528 [in whole cluster]
17334..17528 [in contig]
TypeCDS
Length195 bp (64 aa)
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close this sectionAnnotation

Category4.5 electron carrier
Productputative ferredoxin
Product (GenBank)FscFE
Gene
Gene (GenBank)fscFE
EC number
Keyword
Note
Note (GenBank)
  • putative ferredoxin
Reference
ACC
PmId
[14652074] Organizational and mutational analysis of a complete FR-008/candicidin gene cluster encoding a structurally related polyene complex. (Chem Biol. , 2003)
Related Reference
ACC
P18324
PmId
[1846297] Ferredoxins from two sulfonylurea herbicide monooxygenase systems in Streptomyces griseolus. (Biochemistry. , 1991)

close this sectionSequence

selected fasta
>putative ferredoxin [FscFE]
MRVTVDSEQCVGAGQCVLNAPEVFDQDDDGVVVLLRAEPDERDHEAVRTAGDLCPSASVV
LQED
selected fasta
>putative ferredoxin [FscFE]
ATGCGTGTCACCGTCGACAGCGAGCAGTGCGTAGGAGCGGGCCAGTGCGTCCTGAACGCG
CCGGAGGTCTTCGACCAGGACGACGACGGCGTCGTGGTCCTGCTCCGCGCGGAGCCCGAC
GAGCGGGACCACGAGGCGGTCCGCACGGCGGGCGACCTGTGCCCGTCGGCCTCGGTCGTC
CTCCAGGAGGACTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09
show BLAST table
InterPro
Database:interpro:38.0
IPR001080 3Fe-4S ferredoxin (Family)
 [5-16]  8.8e-06 PR00352 [16-26]  8.8e-06 PR00352 [47-59]  8.8e-06 PR00352
PR00352   3FE4SFRDOXIN
IPR010693 Ferredoxin soy-like (Family)
 [1-60]  1.1e-13 PF06902
PF06902   DUF1271
IPR017896 4Fe-4S ferredoxin-type, iron-sulpur binding domain (Domain)
 [1-29]  7.634 PS51379
PS51379   4FE4S_FER_2
SignalP No significant hit
TMHMM No significant hit