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CDS information : Fren_00060


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Organism
StrainAK24158
Entry nameFrenolicin
Contig
Start / Stop / Direction8,271 / 9,824 / + [in whole cluster]
8,271 / 9,824 / + [in contig]
Location8271..9824 [in whole cluster]
8271..9824 [in contig]
TypeCDS
Length1,554 bp (517 aa)
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close this sectionAnnotation

Category4.3 transport
Productputative drug resistance transporter
Product (GenBank)putative antibiotic antiporter
Gene
Gene (GenBank)frnF
EC number
Keyword
Note
Note (GenBank)
  • FrnF; actVA-ORF1 homolog
Reference
ACC
Related Reference
ACC
Q9WVV3
PmId
[10198016] Mitomycin resistance in Streptomyces lavendulae includes a novel drug-binding-protein-dependent export system. (J Bacteriol. , 1999)

close this sectionSequence

selected fasta
>putative drug resistance transporter [putative antibiotic antiporter]
MSSSPPAPATPGVAPHSPPAPRLGLVLLVCCLAQFLVTLSVAIVNVALPDIQRGLGFSAE
SLQWVVNAYTVTFAGFLLLGGRIADLFGRRRIFLAGVALFALASLAGGLSQNAGTLVAAR
AVQGLAAAVIAPTTLAVLGTSFKDPHQRHRAFGAWGAVSGAGGAFGALAGGALTDAFSWR
WVLFVNLPIGVLLLAGIAWGISELRHAGEDRRIDVAGALTVTLGLLALVLGIVQSGPHGW
GSAATLVPLLGGLALLGAFVLVEGRFAPQPLIPLGIFRSRSVVAANVVAMTSGAALFSMF
YFLTLFLNQVRDYSPLRTGFAYLPLALAIMVAAQFSAALVRVLGPRTTLLVSMALTAAGL
LWLSRLTEDSGFAGGLLGPTLVVGIGQGISMSASAIAGVAGVRPQQAGLASGLLNATRQL
GGALGLAVVAAVATSRADGLLDGVARPTAELARHAQASGHPLSIAVAAALSAVGLLASLA
APGRSPAPTGTRTGGDSAAPAPAAAPAATGTTGPGEI
selected fasta
>putative drug resistance transporter [putative antibiotic antiporter]
ATGTCCTCCTCCCCGCCCGCCCCCGCCACCCCGGGCGTTGCCCCGCACTCGCCGCCCGCT
CCGCGCCTCGGCCTCGTGCTCCTCGTGTGCTGCCTGGCGCAGTTCCTCGTGACGCTCAGC
GTCGCCATCGTCAACGTGGCGCTCCCCGACATCCAGCGCGGGCTCGGCTTCAGCGCCGAG
AGCCTCCAGTGGGTCGTCAACGCCTACACCGTCACCTTCGCGGGCTTCCTGCTCCTCGGC
GGACGGATCGCCGACCTCTTCGGGCGGCGCCGCATCTTCCTCGCGGGTGTCGCGCTCTTC
GCCCTCGCGAGCCTCGCCGGGGGCCTAAGCCAGAACGCGGGGACCCTCGTCGCCGCGCGC
GCCGTGCAGGGCCTCGCCGCCGCCGTCATCGCGCCCACCACCCTCGCCGTGCTCGGCACG
AGCTTCAAGGACCCGCACCAGCGCCACCGCGCCTTCGGCGCCTGGGGCGCGGTCTCCGGT
GCGGGCGGCGCCTTCGGCGCCCTCGCGGGCGGCGCGCTCACGGACGCGTTCTCCTGGCGC
TGGGTGCTCTTCGTCAACCTCCCGATCGGCGTGCTCCTGCTCGCCGGGATCGCCTGGGGC
ATCAGCGAGTTGCGGCACGCGGGCGAGGACCGCCGCATCGACGTCGCGGGCGCCCTCACC
GTGACGCTCGGTCTCCTCGCGCTCGTCCTCGGCATCGTGCAGAGCGGCCCGCACGGCTGG
GGCTCCGCCGCCACCCTCGTCCCGCTCCTCGGCGGCCTCGCCCTGCTCGGTGCCTTCGTT
CTCGTCGAGGGGCGGTTCGCGCCGCAGCCGCTCATACCGCTCGGCATCTTCCGCTCCCGC
TCCGTCGTCGCGGCCAACGTCGTGGCGATGACCAGCGGCGCCGCGCTCTTCAGCATGTTC
TACTTCCTCACCCTCTTCCTCAACCAGGTACGGGACTACAGCCCGCTGCGCACCGGCTTC
GCCTATCTGCCGCTCGCGCTCGCCATCATGGTCGCCGCGCAGTTCTCCGCCGCGCTCGTG
CGCGTCCTCGGCCCCCGTACGACCCTGCTCGTGTCCATGGCTCTCACCGCCGCCGGACTG
CTCTGGCTCTCGCGGCTCACCGAGGACTCCGGGTTCGCGGGCGGACTCCTCGGCCCGACC
CTGGTCGTCGGCATCGGACAGGGCATCTCGATGTCCGCCTCCGCGATCGCGGGGGTCGCC
GGGGTGCGCCCGCAGCAGGCCGGGCTCGCCTCCGGGCTGCTCAACGCGACCCGGCAGCTC
GGCGGCGCCCTCGGCCTCGCGGTCGTCGCCGCCGTCGCCACCTCGCGCGCCGACGGACTC
CTCGACGGGGTCGCGCGGCCCACGGCGGAACTCGCCCGGCACGCCCAGGCGTCCGGGCAC
CCGCTCTCCATCGCCGTGGCCGCGGCGCTGTCCGCCGTCGGCCTGCTCGCCTCGCTCGCC
GCCCCGGGCCGCTCTCCGGCCCCCACCGGCACCCGCACGGGCGGCGACTCCGCCGCACCG
GCTCCCGCGGCGGCCCCCGCCGCCACCGGGACCACCGGCCCCGGCGAGATCTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09
show BLAST table
InterPro
Database:interpro:38.0
IPR001411 Tetracycline resistance protein TetB/drug resistance transporter (Family)
 [29-53]  7.89999609889417e-08 PR01036 [89-111]  7.89999609889417e-08 PR01036 [151-175]  7.89999609889417e-08 PR01036 [416-435]  7.89999609889417e-08 PR01036
PR01036   TCRTETB
IPR005829 Sugar transporter, conserved site (Conserved_site)
 [80-96]  PS00216
PS00216   SUGAR_TRANSPORT_1
IPR011701 Major facilitator superfamily (Family)
 [31-425]  9e-51 PF07690
PF07690   MFS_1
IPR016196 Major facilitator superfamily domain, general substrate transporter (Domain)
 [1-481]  1.79999754022378e-71 SSF103473
SSF103473   MFS_gen_substrate_transporter
IPR020846 Major facilitator superfamily domain (Domain)
 [26-486]  PS50850
PS50850   MFS
SignalP
 [1-41]  0.478 Signal
Bacteria, Gram-positive   
 [1-42]  0.885 Signal
Eukaryota   
TMHMM
 [25-47]  Transmembrane (i-o) [62-84]  Transmembrane (o-i) [91-113]  Transmembrane (i-o) [117-139]  Transmembrane (o-i) [152-174]  Transmembrane (i-o) [179-201]  Transmembrane (o-i) [213-235]  Transmembrane (i-o) [240-262]  Transmembrane (o-i) [283-305]  Transmembrane (i-o) [320-342]  Transmembrane (o-i) [349-366]  Transmembrane (i-o) [376-398]  Transmembrane (o-i) [411-433]  Transmembrane (i-o) [461-483]  Transmembrane (o-i)
Transmembrane 14