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CDS information : Grana_00220


close this sectionLocation

Organism
StrainTü22
Entry nameGranaticin
Contig
Start / Stop / Direction26,000 / 25,200 / - [in whole cluster]
26,000 / 25,200 / - [in contig]
Locationcomplement(25200..26000) [in whole cluster]
complement(25200..26000) [in contig]
TypeCDS
Length801 bp (266 aa)
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close this sectionAnnotation

Category5.4 hypothetical protein
Producthypothetical protein
Product (GenBank)
Gene
Gene (GenBank)gra-orf28
EC number
Keyword
Note
Note (GenBank)
Reference
ACC
PmId
[9831526] The granaticin biosynthetic gene cluster of Streptomyces violaceoruber Tu22: sequence analysis and expression in a heterologous host. (Chem Biol. , 1998)
Related Reference
ACC
Q93IZ2
NITE
Actino_00090
PmId
[1766437] Organisation and functions of the actVA region of the actinorhodin biosynthetic gene cluster of Streptomyces coelicolor. (Mol Gen Genet. , 1991)
ACC
B6SEG3
NITE
Alnu_00180
PmId
[22474343] Biosynthetic pathway toward carbohydrate-like moieties of alnumycins contains unusual steps for C-C bond formation and cleavage. (Proc Natl Acad Sci U S A. , 2012)

close this sectionSequence

selected fasta
>hypothetical protein
MESTENAMTLLFHDDFAEGLRVRDPRIRPDGPWSLRPAGALADGDGAARPTTEGLVVEPT
GTDPETGRPAFVVPPEGETVEHLRWAAFGPACATGGSTLTVSATLSADVPGAAADDIREG
AGALVVLDRDAGLIMDFALTGTQVWALYGRVPASDATRGGFSYSVPLAARQPSDSHRCAL
VVDSAAGVARWLLDGAEVFAVERLGHGLPDPARADAWTPGPLSRVRPASLVPGLALIADS
PHGQGVRLTVSDLAVSALTVTEGVAS
selected fasta
>hypothetical protein
ATGGAGAGTACGGAGAACGCCATGACGCTCCTCTTCCACGACGACTTCGCCGAAGGGCTA
CGGGTGCGCGACCCCCGGATCCGGCCCGACGGTCCCTGGTCGCTACGGCCCGCCGGGGCG
CTCGCCGACGGGGACGGCGCCGCCCGTCCCACGACCGAGGGTCTGGTGGTCGAGCCGACC
GGTACCGACCCGGAGACCGGGCGTCCCGCCTTCGTCGTGCCGCCCGAAGGGGAGACGGTC
GAGCATCTGCGCTGGGCCGCCTTCGGGCCCGCGTGCGCGACCGGCGGCTCCACCCTGACC
GTGTCGGCGACGCTGTCGGCCGACGTACCCGGGGCCGCGGCCGACGACATACGTGAGGGC
GCGGGCGCGCTCGTCGTACTGGACCGCGACGCGGGACTCATCATGGACTTCGCGCTCACC
GGCACACAGGTCTGGGCGCTGTACGGCCGAGTGCCCGCCTCGGACGCCACGCGGGGAGGG
TTCTCGTACAGCGTGCCGCTCGCCGCGCGCCAACCCTCCGACAGCCATCGGTGCGCGCTC
GTCGTGGACTCGGCGGCGGGAGTCGCCCGCTGGTTGCTGGACGGCGCCGAGGTGTTCGCC
GTGGAAAGGCTGGGACACGGCCTTCCCGATCCGGCCCGGGCCGACGCCTGGACCCCGGGG
CCGCTCTCCCGTGTACGGCCCGCTTCCCTTGTGCCCGGCCTGGCTCTCATCGCGGACTCC
CCGCACGGCCAGGGCGTGCGGCTGACCGTCTCCGACCTGGCCGTCTCAGCTCTGACCGTC
ACCGAGGGGGTGGCGAGCTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09
show BLAST table
InterPro No significant hit
SignalP
 [1-25]  0.054 Signal
Eukaryota   
TMHMM No significant hit