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CDS information : Grana_00360


close this sectionLocation

Organism
StrainTü22
Entry nameGranaticin
Contig
Start / Stop / Direction37,617 / 37,991 / + [in whole cluster]
37,617 / 37,991 / + [in contig]
Location37617..37991 [in whole cluster]
37617..37991 [in contig]
TypeCDS
Length375 bp (124 aa)
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close this sectionAnnotation

Category5.4 hypothetical protein
Producthypothetical protein
Product (GenBank)
Gene
Gene (GenBank)gra-orf36
EC number
Keyword
Note
  • It is supposed that this ORF is not involved in granaticin biosynthesis.
Note (GenBank)
Reference
ACC
PmId
[9831526] The granaticin biosynthetic gene cluster of Streptomyces violaceoruber Tu22: sequence analysis and expression in a heterologous host. (Chem Biol. , 1998)

close this sectionSequence

selected fasta
>hypothetical protein
MATAKVKQFWTAFISVVFALLASVGLASTAAAAQAPAVQQPEEPASATPAAARALAAVPA
QRTAPQWPMAHDRALPPTIKQRIRAEAHNSSPSVRHLPADAAPLGTGLADQAELSGLALA
AAKA
selected fasta
>hypothetical protein
ATGGCCACCGCCAAGGTCAAGCAGTTCTGGACCGCCTTCATCTCCGTAGTCTTCGCCCTG
CTCGCCTCCGTCGGCCTGGCGAGCACCGCCGCCGCCGCGCAGGCTCCCGCCGTCCAGCAG
CCGGAGGAGCCGGCCTCGGCCACTCCCGCGGCCGCCCGCGCCCTCGCCGCCGTACCGGCT
CAGCGAACGGCGCCACAGTGGCCCATGGCGCACGACCGCGCCCTGCCGCCCACGATCAAG
CAGCGCATCCGCGCCGAGGCGCACAACTCCTCGCCGTCGGTACGCCATCTCCCCGCCGAC
GCGGCCCCGCTCGGGACCGGCCTCGCGGACCAGGCCGAGCTGTCCGGCCTGGCGCTGGCC
GCCGCGAAGGCGTAG

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09
show BLAST table
InterPro No significant hit
SignalP
 [1-32]  0.999 Signal
Eukaryota   
 [1-32]  1 Signal
Bacteria, Gram-negative   
 [1-32]  1 Signal
Bacteria, Gram-positive   
TMHMM
 [9-31]  Transmembrane (i-o)
Transmembrane 1