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CDS information : Herb_00110

Location

Organism	Streptomyces hygroscopicus
Strain	AM 3672
Entry name	Herbimycin A
Contig	AY947889
Start / Stop / Direction	21,965 / 21,063 / - [in whole cluster] 21,965 / 21,063 / - [in contig]
Location	complement(21063..21965) [in whole cluster] complement(21063..21965) [in contig]
Type	CDS
Length	903 bp (300 aa)

Annotation

Category	5.3 hypothetical protein
Product	hypothetical protein
Product (GenBank)	putative secreted protein
Gene
Gene (GenBank)
EC number
Keyword
Note
Note (GenBank)	ORF17p; ORF17; similar to Streptomyces coelicolor SC6382
Reference	ACC Q49BE7 PmId [16085885] Insights into the biosynthesis of the benzoquinone ansamycins geldanamycin and herbimycin, obtained by gene sequencing and disruption. (Appl Environ Microbiol. , 2005)

Sequence

>hypothetical protein [putative secreted protein]
MDKPTMGRHRRITQPPRSTLATKAALAAGVLVPTIASVGSAHAATPQAAICTSDRPELAD
KLSEDINSALEGSAATTAISLHDRTTNTTCTLDADRHFDSASTVKVTVLGTLLWDAQKDD
RALTQEEKDHATAMITKSDNDATTALWKQLGADKINGFLHAAGMTNTTLDSEGHWGLTQI
TANDEEKLLQLVTHSNPVLSDDSRAYILKLTGEVIPSQRWGTPAGAPSDAQVHVKNGWLE
RATNGWRVHSLGAFTGGDHDYTITVLSQDNATMDDGIANIEGIARAVHENLNAPASGAQS

>hypothetical protein [putative secreted protein]
ATGGACAAGCCCACCATGGGTCGACACCGACGAATAACCCAGCCTCCCCGTAGCACCCTG
GCGACAAAGGCGGCGCTGGCCGCAGGGGTGCTCGTGCCGACGATCGCCTCGGTGGGGTCG
GCACACGCGGCCACCCCGCAGGCGGCGATCTGCACCTCGGACCGGCCGGAACTCGCCGAC
AAGCTCTCCGAGGACATCAACTCGGCACTGGAGGGCTCCGCCGCCACCACGGCGATCAGC
CTCCACGACCGCACCACGAACACCACCTGCACTCTGGACGCGGACCGGCACTTCGACTCC
GCGAGCACGGTCAAGGTGACCGTGCTCGGCACCCTGCTGTGGGACGCGCAGAAGGACGAT
CGCGCCCTGACGCAGGAGGAGAAGGACCATGCCACCGCCATGATCACGAAGTCGGACAAC
GACGCCACCACCGCGCTGTGGAAGCAGCTCGGGGCCGACAAGATCAACGGGTTCCTGCAC
GCCGCGGGGATGACCAACACCACCCTCGACAGCGAGGGCCACTGGGGGCTCACCCAGATC
ACCGCGAACGACGAGGAAAAGCTCCTCCAACTGGTGACCCACAGCAACCCGGTGCTCAGC
GATGACTCCCGCGCCTACATCCTCAAGCTGACGGGCGAGGTCATCCCCTCGCAGCGCTGG
GGCACCCCGGCCGGTGCGCCGAGCGACGCCCAGGTGCATGTGAAGAACGGGTGGCTGGAG
CGGGCCACCAACGGCTGGCGGGTGCACAGCCTCGGCGCCTTCACCGGCGGCGACCACGAC
TACACGATCACGGTGCTCTCGCAGGACAACGCCACGATGGACGACGGCATCGCCAACATC
GAGGGCATCGCCCGCGCGGTCCACGAGAACCTCAACGCGCCCGCGTCCGGCGCTCAGTCG
TAA

Feature

BLASTP Database:UniProtKB:2010_04	show BLAST table
InterPro Database:interpro:26.0	IPR012338 Beta-lactamase-type transpeptidase fold (Domain) SSF56601 PBP_transp_fold
SignalP	Bacteria, Gram-negative Bacteria, Gram-positive Eukaryota
TMHMM	No significant hit

Herb_00100 Herb_00120

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