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CDS information : Kirro_00130


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Organism
StrainTü365
Entry nameKirromycin
Contig
Start / Stop / Direction14,631 / 16,265 / + [in whole cluster]
14,631 / 16,265 / + [in contig]
Location14631..16265 [in whole cluster]
14631..16265 [in contig]
TypeCDS
Length1,635 bp (544 aa)
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close this sectionAnnotation

Category
Product
Product (GenBank)putative major facilitator superfamily transporter
Gene
Gene (GenBank)
EC number
Keyword
Note
  • It is supposed that this ORF is not involved in kirromycin biosynthesis.
Note (GenBank)

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selected fasta
>[putative major facilitator superfamily transporter]
MTPGAGTTKSSAAGARVVLLTLAAGQFLMALDSSVMNVSIAAVAVDVGTTVTGIQGAITA
YTLVMAMFMIPGGKVGALLGRRRGFMIGCCIYGCGSLTTALAPNLGVLLVGWSFLEGIGA
VLILPAVVALVAGNFAVERRAAAYGLVAAAGAVAIALGPLIGGFATTYLSWRWVFAGEVL
VVVGILFLARRLTDVPSGERPHIDFVGTGLSALGLGTFVFGVLRSDEWGWFRPKADAPSW
LGVSLVVWLMLTGVLLIWFFTAWEGRLVAQRREPLLDPALLHNKQLTGGLTMFFFQYLVM
MGVFFVVPLYLSVALGLSALATGGRLLPLSLTLVAAATLIPRLLPDISPRRVVRLGIVAI
LAGAVLLMAALDTGAGAEIVTVPLLLIGLGLGALASQLGSVTVSAVPDEQSADVGGVQNA
VTNLGSSIGTALAGSILLAVLTSSFLTHIADNPAVPARVKNEAAIKLQSGATFLSDAQLK
TALDEAGTSQKVAQAALEANADARLDGLRAALAILAFTSVLAMYFTARLPTAQPRSGGDL
QSVG
selected fasta
>[putative major facilitator superfamily transporter]
ATGACTCCCGGAGCCGGCACGACCAAGAGCTCGGCAGCAGGAGCGCGGGTCGTTCTGCTG
ACACTTGCTGCCGGCCAGTTCCTGATGGCGCTCGACAGTTCCGTCATGAACGTTTCAATC
GCTGCGGTCGCCGTAGACGTCGGCACGACCGTGACCGGGATTCAAGGCGCCATCACGGCG
TACACACTCGTGATGGCGATGTTCATGATTCCCGGCGGCAAGGTCGGAGCGTTGCTCGGC
CGAAGGCGGGGTTTCATGATCGGCTGCTGTATCTACGGATGCGGCTCCCTCACCACCGCT
CTCGCGCCGAATCTGGGCGTGCTGCTGGTCGGCTGGTCGTTCCTCGAAGGAATCGGGGCT
GTGCTCATCCTGCCCGCGGTCGTAGCGCTGGTAGCCGGCAACTTCGCCGTGGAACGACGG
GCGGCCGCCTATGGACTGGTCGCGGCCGCGGGTGCCGTGGCGATCGCGCTCGGGCCGCTC
ATCGGAGGCTTCGCAACCACCTACCTTTCCTGGCGATGGGTGTTCGCCGGTGAGGTCCTG
GTCGTGGTCGGCATCCTGTTCCTCGCTCGCCGTCTCACCGACGTGCCGAGCGGCGAGCGT
CCGCACATCGACTTCGTCGGCACCGGGCTGTCCGCGCTCGGGCTCGGCACCTTTGTCTTC
GGTGTGCTCCGCTCCGACGAATGGGGCTGGTTCAGGCCGAAGGCCGACGCCCCGTCGTGG
CTGGGAGTCTCGCTCGTCGTGTGGCTGATGCTGACGGGCGTGCTCTTGATCTGGTTCTTC
ACCGCGTGGGAGGGCCGCCTCGTGGCACAGCGCCGGGAACCGCTCCTCGACCCGGCCCTG
CTGCACAACAAGCAGCTCACCGGCGGTTTGACCATGTTCTTCTTCCAGTACCTCGTCATG
ATGGGCGTGTTCTTCGTCGTACCGCTGTACCTGTCGGTCGCTCTGGGCCTGTCCGCGCTC
GCGACCGGCGGACGACTTCTACCGCTGTCGCTGACGTTGGTGGCAGCCGCAACCCTCATC
CCACGTCTCCTCCCCGACATCTCACCGAGGCGGGTGGTCCGGCTCGGGATCGTCGCGATC
CTCGCCGGCGCGGTGCTCCTCATGGCCGCCCTCGACACGGGCGCGGGAGCGGAGATCGTC
ACAGTTCCTCTCCTGCTCATCGGGCTCGGCTTGGGTGCGCTGGCGTCCCAGCTCGGCTCC
GTCACCGTCTCCGCGGTGCCGGACGAACAGAGCGCAGACGTCGGTGGTGTGCAGAACGCC
GTCACCAACCTCGGCTCCTCCATCGGCACGGCTCTGGCGGGGTCGATCCTGCTCGCCGTA
CTCACCTCCTCGTTCCTGACCCACATCGCGGACAATCCGGCCGTCCCGGCCAGGGTGAAG
AACGAAGCGGCGATCAAACTCCAGAGTGGGGCGACCTTTCTGTCGGACGCCCAGCTCAAG
ACCGCTCTCGATGAAGCGGGCACGAGCCAGAAGGTGGCCCAGGCAGCGCTGGAGGCCAAC
GCCGACGCCAGGTTGGACGGCCTGCGCGCCGCGCTCGCCATCCTGGCCTTCACCTCCGTC
CTGGCGATGTACTTCACCGCGAGGCTCCCAACCGCCCAGCCCCGCTCCGGTGGAGACCTG
CAGTCGGTCGGGTGA

close this sectionFeature

BLASTP
Database:UniProtKB:2011_09
show BLAST table
InterPro
Database:interpro:38.0
IPR001411 Tetracycline resistance protein TetB/drug resistance transporter (Family)
 [21-45]  6.29999562859499e-10 PR01036 [113-133]  6.29999562859499e-10 PR01036 [143-167]  6.29999562859499e-10 PR01036 [168-192]  6.29999562859499e-10 PR01036
PR01036   TCRTETB
IPR011701 Major facilitator superfamily (Family)
 [23-429]  1.29999999999998e-37 PF07690
PF07690   MFS_1
IPR016196 Major facilitator superfamily domain, general substrate transporter (Domain)
 [1-529]  3.49999466863949e-54 SSF103473
SSF103473   MFS_gen_substrate_transporter
IPR020846 Major facilitator superfamily domain (Domain)
 [18-534]  PS50850
PS50850   MFS
SignalP
 [1-41]  0.624 Signal
Bacteria, Gram-positive   
 [1-30]  0.628 Signal
Bacteria, Gram-negative   
 [1-30]  0.979 Signal
Eukaryota   
TMHMM
 [12-31]  Transmembrane (i-o) [51-73]  Transmembrane (o-i) [86-108]  Transmembrane (i-o) [118-137]  Transmembrane (o-i) [144-166]  Transmembrane (i-o) [171-190]  Transmembrane (o-i) [203-225]  Transmembrane (i-o) [240-262]  Transmembrane (o-i) [294-316]  Transmembrane (i-o) [326-345]  Transmembrane (o-i) [352-371]  Transmembrane (i-o) [381-403]  Transmembrane (o-i) [424-446]  Transmembrane (i-o) [507-529]  Transmembrane (o-i)
Transmembrane 14